Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.88□□□□□ -1.15
ERCC3P19447 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
ERCC3P19447 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
ERCC3P19447 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
ERCC3P19447 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.88□□□□□ -1.15
ERCC3P19447 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 RPL12P23-201ENST00000405880 490 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 AP000357.1-201ENST00000409926 1165 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC7.88□□□□□ -1.15
ERCC3P19447 RPS7P9-201ENST00000414704 586 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.88□□□□□ -1.15
ERCC3P19447 C1DP1-201ENST00000426049 402 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 DPY19L1P2-201ENST00000426647 915 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 AL590128.1-201ENST00000433407 286 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 NANOGP2-201ENST00000435391 727 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 GAPDHP20-201ENST00000444107 1007 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 MTCYBP42-201ENST00000444653 1130 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.88□□□□□ -1.15
ERCC3P19447 AC034244.1-201ENST00000507687 207 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 HMGN2P47-201ENST00000559378 272 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.88□□□□□ -1.15
ERCC3P19447 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 AGGF1P6-201ENST00000569213 976 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 AC020914.7-201ENST00000594477 545 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 AC108865.2-201ENST00000606881 432 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 MIR6806-201ENST00000622141 64 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.88□□□□□ -1.15
ERCC3P19447 AP000550.3-201ENST00000637734 379 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.88□□□□□ -1.15
ERCC3P19447 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.88□□□□□ -1.15
ERCC3P19447 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 UGT2B26P-201ENST00000508672 1613 ntBASIC7.88□□□□□ -1.15
ERCC3P19447 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ERCC3P19447 AC110597.1-201ENST00000562669 3176 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.87□□□□□ -1.15
ERCC3P19447 AL021877.2-201ENST00000624442 10684 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AC140479.2-201ENST00000421567 3130 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
ERCC3P19447 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.87□□□□□ -1.15
ERCC3P19447 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 AC111188.2-201ENST00000529697 1387 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC116158.1-201ENST00000560231 2129 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.87□□□□□ -1.15
ERCC3P19447 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
ERCC3P19447 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 RNU6-1214P-201ENST00000363650 109 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.87□□□□□ -1.15
ERCC3P19447 MTND2P18-201ENST00000419962 1030 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 RPS10P21-201ENST00000430654 475 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC112492.1-201ENST00000449607 712 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.87□□□□□ -1.15
ERCC3P19447 OR2AF1P-201ENST00000454899 889 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AC106822.1-201ENST00000502647 526 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 MTND6P8-201ENST00000503471 522 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.87□□□□□ -1.15
ERCC3P19447 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.87□□□□□ -1.15
ERCC3P19447 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC040904.1-201ENST00000590850 223 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 AL590032.1-201ENST00000604920 252 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AL035410.2-201ENST00000604963 864 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AL135786.2-201ENST00000608422 615 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 AC004241.2-201ENST00000614562 444 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms