Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC9.53□□□□□ -0.88
CFTRP13569 AGGF1P7-201ENST00000562369 913 ntBASIC9.53□□□□□ -0.88
CFTRP13569 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.53□□□□□ -0.88
CFTRP13569 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC9.53□□□□□ -0.88
CFTRP13569 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CFTRP13569 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.53□□□□□ -0.88
CFTRP13569 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 AL034546.1-201ENST00000623740 3693 ntBASIC9.53□□□□□ -0.88
CFTRP13569 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC9.53□□□□□ -0.88
CFTRP13569 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 MIR192-201ENST00000384915 110 ntBASIC9.53□□□□□ -0.88
CFTRP13569 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.53□□□□□ -0.88
CFTRP13569 DNAJA1P4-201ENST00000406473 1166 ntBASIC9.53□□□□□ -0.88
CFTRP13569 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC9.53□□□□□ -0.88
CFTRP13569 RN7SL738P-201ENST00000470264 297 ntBASIC9.53□□□□□ -0.88
CFTRP13569 AC096741.1-201ENST00000472250 846 ntBASIC9.53□□□□□ -0.88
CFTRP13569 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC9.53□□□□□ -0.88
CFTRP13569 AC005084.1-201ENST00000605160 304 ntBASIC9.53□□□□□ -0.88
CFTRP13569 AL353662.3-201ENST00000625131 237 ntBASIC9.53□□□□□ -0.88
CFTRP13569 MIR7641-1-201ENST00000627518 61 ntBASIC9.53□□□□□ -0.88
CFTRP13569 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.53□□□□□ -0.88
CFTRP13569 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
CFTRP13569 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CFTRP13569 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
CFTRP13569 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC9.52□□□□□ -0.89
CFTRP13569 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
CFTRP13569 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
CFTRP13569 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CFTRP13569 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CFTRP13569 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.52□□□□□ -0.89
CFTRP13569 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CFTRP13569 AL162456.1-201ENST00000634535 2006 ntBASIC9.52□□□□□ -0.89
CFTRP13569 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC9.52□□□□□ -0.89
CFTRP13569 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CFTRP13569 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC9.52□□□□□ -0.89
CFTRP13569 AC092647.3-201ENST00000443044 633 ntBASIC9.52□□□□□ -0.89
CFTRP13569 AC002075.1-201ENST00000457396 676 ntBASIC9.52□□□□□ -0.89
CFTRP13569 RPL5P22-201ENST00000480199 884 ntBASIC9.52□□□□□ -0.89
CFTRP13569 AC006115.2-201ENST00000596823 202 ntBASIC9.52□□□□□ -0.89
CFTRP13569 AC008745.1-201ENST00000604064 271 ntBASIC9.52□□□□□ -0.89
CFTRP13569 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC9.52□□□□□ -0.89
CFTRP13569 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.52□□□□□ -0.89
CFTRP13569 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CFTRP13569 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
CFTRP13569 AP002991.2-201ENST00000623807 2801 ntBASIC9.51□□□□□ -0.89
CFTRP13569 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
CFTRP13569 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
CFTRP13569 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC9.51□□□□□ -0.89
CFTRP13569 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 RPL31P44-201ENST00000447680 377 ntBASIC9.51□□□□□ -0.89
CFTRP13569 AC004980.4-201ENST00000513375 203 ntBASIC9.51□□□□□ -0.89
CFTRP13569 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC9.51□□□□□ -0.89
CFTRP13569 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC9.51□□□□□ -0.89
CFTRP13569 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC9.51□□□□□ -0.89
CFTRP13569 MAPK10-350ENST00000641777 965 ntBASIC9.51□□□□□ -0.89
CFTRP13569 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
CFTRP13569 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
CFTRP13569 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.51□□□□□ -0.89
CFTRP13569 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
CFTRP13569 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFTRP13569 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.5□□□□□ -0.89
CFTRP13569 RNA5SP123-201ENST00000363244 119 ntBASIC9.5□□□□□ -0.89
CFTRP13569 RN7SKP113-201ENST00000363891 295 ntBASIC9.5□□□□□ -0.89
CFTRP13569 RNU1-146P-201ENST00000364015 165 ntBASIC9.5□□□□□ -0.89
CFTRP13569 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC9.5□□□□□ -0.89
CFTRP13569 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.5□□□□□ -0.89
CFTRP13569 AL138878.2-201ENST00000440581 1241 ntBASIC9.5□□□□□ -0.89
CFTRP13569 PRELID3BP5-201ENST00000508612 460 ntBASIC9.5□□□□□ -0.89
CFTRP13569 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC9.5□□□□□ -0.89
CFTRP13569 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC9.5□□□□□ -0.89
CFTRP13569 RNA5SP373-201ENST00000517271 95 ntBASIC9.5□□□□□ -0.89
CFTRP13569 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.5□□□□□ -0.89
CFTRP13569 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC9.5□□□□□ -0.89
CFTRP13569 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC9.5□□□□□ -0.89
CFTRP13569 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC9.5□□□□□ -0.89
CFTRP13569 NANOGP3-201ENST00000605855 286 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms