Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CXCL1P09341 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CXCL1P09341 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 OR10R3P-201ENST00000361688 942 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 RPL21P67-201ENST00000402896 478 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 FTH1P26-201ENST00000406512 701 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 AL139100.1-201ENST00000408001 498 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 RN7SKP39-201ENST00000410773 322 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 RPL12P12-201ENST00000424633 501 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 AL138479.1-201ENST00000426913 484 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.39□□□□□ -1.71
CXCL1P09341 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC4.39□□□□□ -1.71
CXCL1P09341 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC104164.1-201ENST00000460282 590 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 RN7SL273P-201ENST00000481561 299 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 NPM1P29-201ENST00000483112 803 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 RPL5P33-201ENST00000487833 905 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 RN7SL104P-201ENST00000498686 293 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.39□□□□□ -1.71
CXCL1P09341 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.39□□□□□ -1.71
CXCL1P09341 GAPDHP71-201ENST00000511530 1003 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.39□□□□□ -1.71
CXCL1P09341 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
CXCL1P09341 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC015674.1-201ENST00000578482 267 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC004839.1-201ENST00000610269 501 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 uc_338.33-201ENST00000614988 170 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 AL035661.1-201ENST00000620459 1144 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 TET1P1-201ENST00000426627 2301 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CXCL1P09341 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.39□□□□□ -1.71
CXCL1P09341 AC079097.1-201ENST00000512187 1399 ntBASIC4.39□□□□□ -1.71
CXCL1P09341 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.39□□□□□ -1.71
CXCL1P09341 AP005432.1-201ENST00000580891 3485 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.38□□□□□ -1.71
CXCL1P09341 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 ICE2P1-201ENST00000512800 1849 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CXCL1P09341 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CXCL1P09341 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CXCL1P09341 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 RNA5SP429-201ENST00000363688 109 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CXCL1P09341 AL359643.1-201ENST00000404109 423 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 MIR1271-201ENST00000408537 86 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 RN7SKP205-201ENST00000410999 307 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.38□□□□□ -1.71
CXCL1P09341 AL139135.1-201ENST00000412675 209 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AL360013.1-201ENST00000419031 858 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 ELOBP4-201ENST00000423418 296 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.38□□□□□ -1.71
CXCL1P09341 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.38□□□□□ -1.71
CXCL1P09341 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 NPM1P23-201ENST00000440193 849 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 EIF5AP4-201ENST00000441206 465 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 BMS1P11-201ENST00000442351 885 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CXCL1P09341 AC234771.2-201ENST00000445718 597 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC016027.4-201ENST00000450866 277 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 BMS1P9-201ENST00000457640 885 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 RN7SL83P-201ENST00000468131 297 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.38□□□□□ -1.71
CXCL1P09341 RPL5P22-201ENST00000480199 884 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC083795.1-201ENST00000491760 320 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 GM2AP2-201ENST00000491764 562 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC090638.1-201ENST00000498296 909 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.38□□□□□ -1.71
CXCL1P09341 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.38□□□□□ -1.71
CXCL1P09341 SLC25A51P2-201ENST00000535708 889 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms