Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 MIR4732-201ENST00000581873 76 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 MIR3936-201ENST00000584304 110 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 RPL7AP69-201ENST00000595306 806 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 AC005702.3-201ENST00000585345 1447 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 OR4G1P-202ENST00000641173 1788 ntBASIC4.35□□□□□ -1.71
HLA-DQA1P01909 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQA1P01909 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 THAP12P5-201ENST00000405864 2275 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC010894.1-201ENST00000313760 361 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 RNU105B-201ENST00000364478 208 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 RN7SKP221-201ENST00000410420 301 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 RN7SKP121-201ENST00000410842 305 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC083862.1-201ENST00000427378 1242 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC005165.2-201ENST00000466070 380 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC090589.1-201ENST00000473109 362 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 RPS4XP17-201ENST00000479057 754 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 RN7SL413P-201ENST00000482700 297 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC093870.1-201ENST00000506837 213 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC021193.1-201ENST00000511607 420 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 OR56A7P-201ENST00000524865 941 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 RPL41P2-201ENST00000544920 409 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 RPL3P13-201ENST00000550415 216 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC022001.1-201ENST00000605193 268 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AL161912.3-201ENST00000605404 628 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AL008582.1-201ENST00000609612 442 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC091932.2-201ENST00000623014 291 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AP003072.5-201ENST00000623872 773 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 FBXL21-201ENST00000297158 1305 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AC012078.1-201ENST00000405035 1646 ntBASIC4.34□□□□□ -1.71
HLA-DQA1P01909 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQA1P01909 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.34□□□□□ -1.72
HLA-DQA1P01909 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1P01909 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1P01909 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1P01909 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1P01909 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1P01909 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms