Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.62□□□□□ -1.51
SNX3O60493 RN7SKP39-201ENST00000410773 322 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX3O60493 MTND2P12-201ENST00000417560 1252 ntBASIC5.62□□□□□ -1.51
SNX3O60493 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 SEPT14P12-201ENST00000442280 560 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AC023141.8-201ENST00000442554 208 ntBASIC5.62□□□□□ -1.51
SNX3O60493 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.62□□□□□ -1.51
SNX3O60493 OR7E116P-201ENST00000448529 957 ntBASIC5.62□□□□□ -1.51
SNX3O60493 PCMTD1P3-201ENST00000451824 472 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX3O60493 AC021660.1-201ENST00000465006 554 ntBASIC5.62□□□□□ -1.51
SNX3O60493 PSAT1P4-201ENST00000466500 526 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX3O60493 AC069304.1-201ENST00000491593 704 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AL049874.2-201ENST00000492636 288 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AC023424.1-201ENST00000496058 459 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX3O60493 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX3O60493 AC092709.1-201ENST00000521355 1045 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX3O60493 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.62□□□□□ -1.51
SNX3O60493 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX3O60493 SLC25A51P2-201ENST00000535708 889 ntBASIC5.62□□□□□ -1.51
SNX3O60493 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 AC127024.5-201ENST00000580085 462 ntBASIC5.62□□□□□ -1.51
SNX3O60493 OR7E19P-202ENST00000589942 844 ntBASIC5.62□□□□□ -1.51
SNX3O60493 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.62□□□□□ -1.51
SNX3O60493 COX6CP7-201ENST00000597056 208 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX3O60493 BNIP3P7-201ENST00000605641 516 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AC145423.1-201ENST00000605712 336 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AL133406.3-201ENST00000606817 541 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.62□□□□□ -1.51
SNX3O60493 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.62□□□□□ -1.51
SNX3O60493 SAMMSON-227ENST00000642114 1199 ntBASIC5.62□□□□□ -1.51
SNX3O60493 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.62□□□□□ -1.51
SNX3O60493 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.62□□□□□ -1.51
SNX3O60493 AL078595.2-201ENST00000605309 1780 ntBASIC5.62□□□□□ -1.51
SNX3O60493 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SNX3O60493 AL078621.3-201ENST00000623707 2042 ntBASIC5.62□□□□□ -1.51
SNX3O60493 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 THAP12P8-201ENST00000447914 2115 ntBASIC5.62□□□□□ -1.51
SNX3O60493 AP001284.1-201ENST00000528393 2118 ntBASIC5.62□□□□□ -1.51
SNX3O60493 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX3O60493 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX3O60493 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SNX3O60493 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 RNU4-23P-201ENST00000362839 140 ntBASIC5.61□□□□□ -1.51
SNX3O60493 SNRPEP6-201ENST00000407465 277 ntBASIC5.61□□□□□ -1.51
SNX3O60493 CTSL3P-202ENST00000412179 788 ntBASIC5.61□□□□□ -1.51
SNX3O60493 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX3O60493 COX5BP7-201ENST00000414780 274 ntBASIC5.61□□□□□ -1.51
SNX3O60493 MTND4LP21-201ENST00000415303 295 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX3O60493 AL672212.1-201ENST00000422246 400 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX3O60493 TMEM183AP1-205ENST00000432739 290 ntBASIC5.61□□□□□ -1.51
SNX3O60493 RPS18P1-201ENST00000447840 458 ntBASIC5.61□□□□□ -1.51
SNX3O60493 OR6C72P-201ENST00000451403 892 ntBASIC5.61□□□□□ -1.51
SNX3O60493 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
SNX3O60493 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SNX3O60493 DUTP1-201ENST00000493631 470 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX3O60493 AC120036.2-201ENST00000509729 1474 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AC095052.1-201ENST00000509955 863 ntBASIC5.61□□□□□ -1.51
SNX3O60493 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX3O60493 RN7SKP253-201ENST00000516424 309 ntBASIC5.61□□□□□ -1.51
SNX3O60493 GTF2IP11-201ENST00000526931 420 ntBASIC5.61□□□□□ -1.51
SNX3O60493 OR9G2P-201ENST00000533326 880 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX3O60493 AC005632.2-201ENST00000564271 828 ntBASIC5.61□□□□□ -1.51
SNX3O60493 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX3O60493 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.61□□□□□ -1.51
SNX3O60493 AC100832.2-201ENST00000582080 776 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX3O60493 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.61□□□□□ -1.51
SNX3O60493 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.61□□□□□ -1.51
SNX3O60493 AL049829.3-202ENST00000604278 711 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AC091167.5-201ENST00000605689 894 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AC018690.1-201ENST00000608144 626 ntBASIC5.61□□□□□ -1.51
SNX3O60493 MIR6726-201ENST00000613751 61 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AC091932.2-201ENST00000623014 291 ntBASIC5.61□□□□□ -1.51
SNX3O60493 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms