Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 TTC3P1-201ENST00000399586 6081 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 AC011447.7-201ENST00000624228 1590 ntBASIC8.34□□□□□ -1.07
HOXA2O43364 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.34□□□□□ -1.07
HOXA2O43364 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HOXA2O43364 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HOXA2O43364 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
HOXA2O43364 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.08
HOXA2O43364 AL391666.1-201ENST00000442570 2764 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 AC124045.1-201ENST00000606008 1953 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXA2O43364 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXA2O43364 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
HOXA2O43364 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.33□□□□□ -1.08
HOXA2O43364 MAPK10-329ENST00000641555 2656 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
HOXA2O43364 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXA2O43364 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
HOXA2O43364 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
HOXA2O43364 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXA2O43364 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 ERMN-204ENST00000409925 556 ntTSL 4 BASIC8.33□□□□□ -1.08
HOXA2O43364 Y_RNA.598-201ENST00000410480 95 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
HOXA2O43364 OR4F13P-201ENST00000428478 931 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 VDAC2P3-201ENST00000430995 828 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.33□□□□□ -1.08
HOXA2O43364 LDHAP2-201ENST00000437325 985 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
HOXA2O43364 RPS29P25-201ENST00000481709 171 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 AC073522.1-201ENST00000483312 377 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC8.33□□□□□ -1.08
HOXA2O43364 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXA2O43364 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC8.33□□□□□ -1.08
HOXA2O43364 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXA2O43364 RPL7L1P4-201ENST00000513004 707 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 SNORA18.6-201ENST00000516792 115 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 MTND6P19-201ENST00000519399 524 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 OR4A45P-201ENST00000529954 901 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 AC025260.1-201ENST00000548858 430 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 AL352979.3-201ENST00000553515 247 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 AL121821.2-201ENST00000556081 394 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.33□□□□□ -1.08
HOXA2O43364 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC8.33□□□□□ -1.08
HOXA2O43364 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.33□□□□□ -1.08
HOXA2O43364 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC8.33□□□□□ -1.08
HOXA2O43364 OR5AH1P-201ENST00000595968 283 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC8.33□□□□□ -1.08
HOXA2O43364 MEMO1P5-201ENST00000604810 406 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC8.33□□□□□ -1.08
HOXA2O43364 AC093388.1-201ENST00000609166 430 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 AL160413.1-201ENST00000622780 310 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC8.33□□□□□ -1.08
HOXA2O43364 ATE1-AS1-202ENST00000636460 506 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
HOXA2O43364 AL121936.2-201ENST00000641935 662 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 AC079097.1-201ENST00000512187 1399 ntBASIC8.33□□□□□ -1.08
HOXA2O43364 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HOXA2O43364 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.32□□□□□ -1.08
HOXA2O43364 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms