Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SDCBPO00560 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.85□□□□□ -1.63
SDCBPO00560 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.85□□□□□ -1.63
SDCBPO00560 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.85□□□□□ -1.63
SDCBPO00560 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SDCBPO00560 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SDCBPO00560 SELENOWP1-201ENST00000322792 252 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 SNORA5.1-201ENST00000384275 131 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 SNORA51.9-201ENST00000384295 124 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SDCBPO00560 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.85□□□□□ -1.63
SDCBPO00560 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.85□□□□□ -1.63
SDCBPO00560 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.85□□□□□ -1.63
SDCBPO00560 RNGTTP1-201ENST00000420965 728 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 AL354893.1-201ENST00000433735 348 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 CLNS1AP1-201ENST00000435954 682 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 TUBB4BP6-201ENST00000437576 479 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 AC015983.1-201ENST00000441577 373 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 AC005077.1-201ENST00000449226 375 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 MEMO1P4-201ENST00000453590 386 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 SETP4-201ENST00000455717 868 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.85□□□□□ -1.63
SDCBPO00560 RN7SL269P-201ENST00000467795 305 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 RPSAP51-201ENST00000497462 645 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 AC092349.1-201ENST00000504903 310 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.85□□□□□ -1.63
SDCBPO00560 RN7SKP238-201ENST00000516483 249 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.85□□□□□ -1.63
SDCBPO00560 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.85□□□□□ -1.63
SDCBPO00560 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 AP005119.1-201ENST00000580956 292 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 AC124916.2-201ENST00000604416 224 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 AC091167.5-201ENST00000605689 894 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 MIR6133-201ENST00000617057 108 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 AC245014.3-201ENST00000618589 347 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.85□□□□□ -1.63
SDCBPO00560 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.85□□□□□ -1.63
SDCBPO00560 AL035661.1-201ENST00000620459 1144 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.85□□□□□ -1.63
SDCBPO00560 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.85□□□□□ -1.63
SDCBPO00560 PSG10P-201ENST00000501199 1500 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SDCBPO00560 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 AC007938.2-201ENST00000604666 2634 ntBASIC4.85□□□□□ -1.63
SDCBPO00560 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SDCBPO00560 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SDCBPO00560 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.85□□□□□ -1.63
SDCBPO00560 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.84□□□□□ -1.63
SDCBPO00560 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.84□□□□□ -1.63
SDCBPO00560 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SDCBPO00560 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.84□□□□□ -1.63
SDCBPO00560 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.84□□□□□ -1.63
SDCBPO00560 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SDCBPO00560 QRSL1P1-201ENST00000400977 1540 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AC093225.1-201ENST00000506867 1408 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.84□□□□□ -1.63
SDCBPO00560 AL354854.1-201ENST00000455940 1363 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SDCBPO00560 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.84□□□□□ -1.63
SDCBPO00560 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 RN7SKP171-201ENST00000364417 303 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 NPM1P37-201ENST00000403105 874 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 MIR1275-201ENST00000408770 80 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AL133482.1-201ENST00000415988 498 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 VN1R21P-201ENST00000426703 765 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.84□□□□□ -1.63
SDCBPO00560 ATP5LP2-201ENST00000440646 311 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.84□□□□□ -1.63
SDCBPO00560 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 AC099521.1-201ENST00000482557 334 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AC105420.1-201ENST00000504389 582 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AC122718.2-201ENST00000505325 591 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AC105384.2-201ENST00000508433 640 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 HSD3BP3-201ENST00000514706 994 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 WBP1LP3-201ENST00000523033 208 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.84□□□□□ -1.63
SDCBPO00560 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.84□□□□□ -1.63
SDCBPO00560 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.84□□□□□ -1.63
SDCBPO00560 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.84□□□□□ -1.63
SDCBPO00560 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.84□□□□□ -1.63
SDCBPO00560 RPA2P1-201ENST00000556557 721 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.84□□□□□ -1.63
SDCBPO00560 AC002310.3-201ENST00000569728 723 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 OR1E3-201ENST00000575608 948 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms