Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC132825.1-201ENST00000463573 2247 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC007406.5-201ENST00000570140 3170 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AC010329.1-201ENST00000593903 8328 ntBASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PCDHB1Q9Y5F3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 SAGE3P-201ENST00000619800 1635 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 RNU1-84P-201ENST00000365447 164 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 PTP4A1P7-201ENST00000423476 514 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 BX119321.1-201ENST00000428912 797 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AL138787.1-202ENST00000437804 898 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AL020997.1-201ENST00000446554 349 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 HMGB1P26-201ENST00000452520 628 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 IGKV1D-22-201ENST00000518953 324 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC034205.1-201ENST00000520621 638 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 BUD31P1-201ENST00000521828 359 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 MIR4509-3-201ENST00000578671 94 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC233702.7-202ENST00000582941 211 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 MIR4509-2-201ENST00000583920 94 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC011497.2-201ENST00000600255 639 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 BMS1P7-201ENST00000602440 1052 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC018690.1-201ENST00000608144 626 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AL365181.4-201ENST00000609800 547 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC004908.3-201ENST00000610248 625 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 MIR4509-1-201ENST00000618224 94 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AL596275.2-208ENST00000641192 594 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC119674.1-213ENST00000641177 1386 ntBASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.41□□□□□ -1.38
PCDHB1Q9Y5F3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC008957.3-201ENST00000624112 2242 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 RN7SKP78-201ENST00000364711 318 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms