Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.23□□□□□ -1.57
COPS3Q9UNS2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 RBMY1HP-201ENST00000382759 1389 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AL137058.3-201ENST00000624531 3099 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 SNRPEP6-201ENST00000407465 277 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 CRIP1P1-201ENST00000427567 185 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC096775.1-201ENST00000437724 448 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 RPS7P3-201ENST00000443360 580 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC073072.2-201ENST00000447425 348 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC004129.2-201ENST00000457229 287 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC083795.1-201ENST00000491760 320 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 HMGN1P16-201ENST00000508308 283 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 MRPS5P3-201ENST00000515577 166 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 RNU6-1334P-201ENST00000516032 105 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 RN7SKP5-201ENST00000517045 272 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 TMEM97P2-201ENST00000517841 403 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC027026.1-201ENST00000532323 742 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 ADAM3B-201ENST00000569937 840 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 NDUFB9P1-201ENST00000604683 510 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC011891.2-201ENST00000604949 397 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AL512652.1-201ENST00000619006 500 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC079776.5-201ENST00000641920 211 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 FBXL21-201ENST00000297158 1305 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 CR383656.5-201ENST00000547616 1340 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.22□□□□□ -1.57
COPS3Q9UNS2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPS3Q9UNS2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COPS3Q9UNS2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
COPS3Q9UNS2 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
COPS3Q9UNS2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COPS3Q9UNS2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COPS3Q9UNS2 MFSD8-239ENST00000641590 2479 ntBASIC5.21□□□□□ -1.57
COPS3Q9UNS2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COPS3Q9UNS2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 RN7SKP78-201ENST00000364711 318 ntBASIC5.21□□□□□ -1.58
COPS3Q9UNS2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 AC006539.1-201ENST00000481419 501 ntBASIC5.21□□□□□ -1.58
COPS3Q9UNS2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.21□□□□□ -1.58
COPS3Q9UNS2 AC112184.1-201ENST00000505179 312 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms