Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC135626.1-201ENST00000556983 435 ntBASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 AC012146.2-201ENST00000576545 416 ntBASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 OOSP1P2-201ENST00000579644 351 ntBASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 AL049840.6-201ENST00000604583 345 ntBASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 FAM27E4-201ENST00000605259 342 ntBASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP2Q9UDT6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CLIP2Q9UDT6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CLIP2Q9UDT6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.96□□□□□ -1.29
CLIP2Q9UDT6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.96□□□□□ -1.29
CLIP2Q9UDT6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 RN7SKP292-201ENST00000365522 317 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC016739.1-201ENST00000405359 345 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC126120.1-201ENST00000431082 470 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 RPL36AP39-201ENST00000445859 318 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 OR2AF1P-201ENST00000454899 889 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 ACA64.4-201ENST00000459070 127 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 RN7SL753P-201ENST00000581238 290 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC004890.3-201ENST00000605566 1095 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AL357153.4-201ENST00000620487 1016 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 KYNUP3-201ENST00000574386 1341 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 AC015689.2-201ENST00000528172 1738 ntBASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP2Q9UDT6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 PDZK1P1-202ENST00000425209 1350 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 RNA5SP500-201ENST00000364486 119 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 RNU11-201ENST00000387069 134 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 SNORA17A-201ENST00000391185 133 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 RN7SKP166-201ENST00000410812 305 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AL161636.2-201ENST00000445179 927 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AL445665.1-202ENST00000452436 324 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 GTF2IP11-201ENST00000526931 420 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AC079600.1-201ENST00000550326 297 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AL360012.1-201ENST00000602813 131 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 SNORA17.5-201ENST00000630429 132 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AC000095.2-202ENST00000637415 154 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms