Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SNORA70D-201ENST00000578836 135 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC011497.2-201ENST00000600255 639 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC068768.2-201ENST00000602352 343 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 AL159169.2-201ENST00000610061 1269 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC020978.9-201ENST00000624380 1141 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 SHQ1P1-201ENST00000437111 1544 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AP001002.1-201ENST00000625148 1513 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 CR788268.1-201ENST00000603931 1809 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 OR52B3P-201ENST00000314715 928 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 AL049697.3-201ENST00000406493 982 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 SUMO2P1-206ENST00000445436 284 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 RPSAP39-201ENST00000467439 883 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC022206.1-201ENST00000495947 347 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 OR4D12P-201ENST00000509361 911 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC106806.2-201ENST00000509365 500 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 KCTD9P4-201ENST00000526766 1166 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 OR4R2P-201ENST00000530815 597 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC005021.1-201ENST00000608730 355 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 CR589904.2-201ENST00000612533 440 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.53□□□□□ -1.04
USP35Q9P2H5 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
USP35Q9P2H5 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USP35Q9P2H5 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
USP35Q9P2H5 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
USP35Q9P2H5 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC8.52□□□□□ -1.04
USP35Q9P2H5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.52□□□□□ -1.04
USP35Q9P2H5 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.52□□□□□ -1.04
USP35Q9P2H5 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
USP35Q9P2H5 MAPK10-261ENST00000641050 3109 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 IMMTP1-201ENST00000435590 2219 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 RNA5SP346-201ENST00000363541 121 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 PPCS-201ENST00000372556 984 ntTSL 2 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 AL672167.2-201ENST00000377164 879 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 AP003170.5-201ENST00000397185 335 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 RN7SKP271-201ENST00000410528 320 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 AC073508.1-201ENST00000428866 656 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 SOCS5P1-201ENST00000440415 949 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 XKRY2-201ENST00000442362 1093 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 CABYRP1-201ENST00000465493 1045 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 AC098583.1-201ENST00000480875 255 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 AC093663.2-201ENST00000484625 313 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 PRMT5P1-201ENST00000514351 598 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 AC008429.4-201ENST00000521201 182 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 AC112191.2-201ENST00000522428 333 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 MIR4420-201ENST00000583944 77 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 AL356986.1-201ENST00000604085 341 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 AL021707.7-201ENST00000607991 416 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 RN7SL787P-201ENST00000613000 284 ntBASIC8.52□□□□□ -1.05
USP35Q9P2H5 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms