Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AC015799.1-201ENST00000622996 3122 ntBASIC5.54□□□□□ -1.52
CCDC88CQ9P219 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 WDR95P-201ENST00000425638 1542 ntBASIC5.54□□□□□ -1.52
CCDC88CQ9P219 AC138907.8-201ENST00000623981 2256 ntBASIC5.54□□□□□ -1.52
CCDC88CQ9P219 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CCDC88CQ9P219 GNG5P2-201ENST00000372054 207 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC005042.1-201ENST00000393397 800 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 MRE11P1-201ENST00000464884 2127 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RN7SL799P-201ENST00000475891 298 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC006539.1-201ENST00000481419 501 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RPS3AP15-201ENST00000483874 781 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC125612.1-201ENST00000547580 377 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC004477.3-201ENST00000614061 590 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC136428.4-201ENST00000634254 1155 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC104964.3-201ENST00000606115 2860 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 OR13C1P-202ENST00000641378 2919 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RN7SKP69-201ENST00000365390 305 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RNU11-201ENST00000387069 134 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 GABARAPL3-201ENST00000412799 354 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC099677.3-201ENST00000427081 395 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC073909.1-201ENST00000447112 999 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC073610.1-201ENST00000489971 396 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC022826.1-201ENST00000519383 805 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AL360012.1-201ENST00000602813 131 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AL136131.3-201ENST00000607600 188 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AL355974.3-201ENST00000617383 467 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RBPJP7-201ENST00000442803 1447 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 RBPJP5-201ENST00000449433 1447 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 AC025470.1-201ENST00000510053 2032 ntBASIC5.53□□□□□ -1.52
CCDC88CQ9P219 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC88CQ9P219 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC140479.2-201ENST00000421567 3130 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 MIR1178-201ENST00000408396 91 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AL590399.2-201ENST00000427536 309 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 ZNF322P1-201ENST00000568013 1209 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms