Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL20A1Q9P218 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL20A1Q9P218 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL20A1Q9P218 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL20A1Q9P218 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 RNU6-697P-201ENST00000363348 107 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 RNA5SP242-201ENST00000364171 118 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 AL353625.1-202ENST00000366273 571 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 RN7SKP151-201ENST00000410230 316 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 RN7SKP166-201ENST00000410812 305 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 RPS4XP5-201ENST00000419038 768 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC093155.2-201ENST00000420734 937 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 ARAFP1-201ENST00000422172 605 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC127526.2-201ENST00000426436 775 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC064862.4-201ENST00000442180 334 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 RAB28P2-201ENST00000454299 641 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 RN7SL352P-201ENST00000466002 277 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 CCDC11P1-201ENST00000503137 1162 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC106872.4-201ENST00000510050 523 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC015802.2-201ENST00000589690 189 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AL049840.6-201ENST00000604583 345 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 PPATP2-201ENST00000605635 508 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 FAM72A-208ENST00000607379 1139 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC004836.1-201ENST00000623032 634 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AC106858.1-201ENST00000637497 429 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 MIR4302-201ENST00000638058 60 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 PDZK1P1-202ENST00000425209 1350 ntBASIC6.76□□□□□ -1.33
COL20A1Q9P218 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL20A1Q9P218 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.76□□□□□ -1.33
COL20A1Q9P218 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL20A1Q9P218 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 OR52B5P-204ENST00000641744 3467 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL20A1Q9P218 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL20A1Q9P218 RNA5SP211-201ENST00000365516 117 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 AMZ2P2-201ENST00000406819 1057 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 RN7SKP29-201ENST00000410957 272 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC015977.1-201ENST00000418887 292 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 BX119321.1-201ENST00000428912 797 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.75□□□□□ -1.33
COL20A1Q9P218 MTND2P25-201ENST00000449028 610 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC018638.3-201ENST00000461273 132 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AL157777.1-201ENST00000468100 304 ntBASIC6.75□□□□□ -1.33
COL20A1Q9P218 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms