Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC144530.1-201ENST00000452862 555 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 MRE11P1-201ENST00000464884 2127 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC021146.10-201ENST00000515628 706 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC022826.1-201ENST00000519383 805 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC139697.1-201ENST00000548429 745 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 HSPE1P2-201ENST00000554777 306 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AP001496.3-201ENST00000580230 913 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC015982.1-201ENST00000608113 465 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 DNM1P47-203ENST00000571780 12667 ntBASIC6.09□□□□□ -1.43
CISHQ9NSE2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CISHQ9NSE2 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.09□□□□□ -1.43
CISHQ9NSE2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.09□□□□□ -1.44
CISHQ9NSE2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CISHQ9NSE2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.09□□□□□ -1.44
CISHQ9NSE2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CISHQ9NSE2 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CISHQ9NSE2 AC015689.2-201ENST00000528172 1738 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 U3.10-201ENST00000364459 214 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 RN7SKP292-201ENST00000365522 317 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 RNA5SP30-201ENST00000365552 115 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 RNU1-136P-201ENST00000384181 164 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 NME1P1-201ENST00000420914 382 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 AC007998.1-201ENST00000474156 672 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 RPS3AP15-201ENST00000483874 781 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 OR7E157P-201ENST00000494376 911 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 MRPS16P1-201ENST00000523462 412 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 AGGF1P7-201ENST00000562369 913 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 DHFRP1-201ENST00000579682 559 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CISHQ9NSE2 MIR193BHG-214ENST00000641765 509 ntBASIC6.08□□□□□ -1.44
CISHQ9NSE2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CISHQ9NSE2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CISHQ9NSE2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CISHQ9NSE2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CISHQ9NSE2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CISHQ9NSE2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CISHQ9NSE2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 AC007159.1-201ENST00000566529 4706 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 RN7SKP15-201ENST00000364742 309 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 RNA5SP284-201ENST00000384547 118 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 RPS6P23-201ENST00000413224 722 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 AC093155.2-201ENST00000420734 937 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 AC079807.1-201ENST00000429993 481 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 RPS29P14-201ENST00000431518 171 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 RPL23AP19-201ENST00000436229 369 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 TRIM51DP-201ENST00000529746 596 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms