Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 AP005262.1-201ENST00000582646 997 ntBASIC5.25□□□□□ -1.57
HMG20AQ9NP66 MIR212-201ENST00000586026 110 ntBASIC5.25□□□□□ -1.57
HMG20AQ9NP66 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 AC026367.3-201ENST00000619032 590 ntBASIC5.25□□□□□ -1.57
HMG20AQ9NP66 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 MIR6811-201ENST00000620409 58 ntBASIC5.25□□□□□ -1.57
HMG20AQ9NP66 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.25□□□□□ -1.57
HMG20AQ9NP66 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 AC144833.1-201ENST00000567953 4089 ntBASIC5.25□□□□□ -1.57
HMG20AQ9NP66 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.25□□□□□ -1.57
HMG20AQ9NP66 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 CASC19-246ENST00000641625 1606 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 MUC2-202ENST00000613187 4845 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 RNU1-49P-201ENST00000363468 159 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 RNU1-136P-201ENST00000384181 164 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 SETP15-201ENST00000412724 337 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 RPEP4-201ENST00000437636 602 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 PPIAP10-201ENST00000438675 458 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 GAPDHP23-201ENST00000444823 993 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 MIR7853-201ENST00000584820 132 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AL589765.6-201ENST00000601909 549 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 HIRAP1-201ENST00000605318 787 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC139792.1-201ENST00000607051 647 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 RN7SL261P-201ENST00000613441 282 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 GAPDHP41-201ENST00000613707 975 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 ADAM5-202ENST00000399789 1942 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 AC025574.1-201ENST00000554784 1653 ntBASIC5.24□□□□□ -1.57
HMG20AQ9NP66 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HMG20AQ9NP66 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 OSTCP4-201ENST00000424397 449 ntBASIC5.23□□□□□ -1.57
HMG20AQ9NP66 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 OR52I1-201ENST00000450052 1050 ntBASIC5.23□□□□□ -1.57
HMG20AQ9NP66 AL603882.1-201ENST00000463059 681 ntBASIC5.23□□□□□ -1.57
HMG20AQ9NP66 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 SNX18P24-201ENST00000505249 671 ntBASIC5.23□□□□□ -1.57
HMG20AQ9NP66 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.23□□□□□ -1.57
HMG20AQ9NP66 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 507.5 ms