Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC127024.6-201ENST00000621598 424 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 PARP4P2-201ENST00000446672 3326 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 AC123769.1-201ENST00000530992 3192 ntBASIC6.96□□□□□ -1.3
UPF3BQ9BZI7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AL355834.1-201ENST00000556602 3965 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AL591135.1-201ENST00000401578 5914 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 HSPD1P9-201ENST00000420325 1636 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC239868.2-201ENST00000564237 4527 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC096775.1-201ENST00000437724 448 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC097463.1-201ENST00000447288 481 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC128716.1-201ENST00000475129 166 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 PPP1R11P1-201ENST00000486095 376 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC090058.1-201ENST00000498788 435 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 RPL7L1P4-201ENST00000513004 707 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 IGLV3-30-201ENST00000524362 298 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 OR4A42P-201ENST00000531397 938 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 CYCSP38-201ENST00000559840 322 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC060780.2-201ENST00000589047 198 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AL513327.3-201ENST00000602618 469 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AL133481.2-203ENST00000607558 139 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC024884.1-201ENST00000620583 399 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC069542.2-201ENST00000624816 216 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 MSL3P1-202ENST00000440028 1468 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UPF3BQ9BZI7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AC104964.3-201ENST00000606115 2860 ntBASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 RNFT1P3-201ENST00000340898 1052 ntBASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 RNA5SP91-201ENST00000390902 119 ntBASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 CRIP1P1-201ENST00000427567 185 ntBASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 RN7SL629P-201ENST00000489622 285 ntBASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UPF3BQ9BZI7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms