Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 RNU4-81P-201ENST00000363561 144 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 RN7SKP107-201ENST00000364157 290 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 RNA5SP172-201ENST00000365061 118 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 RNU6-549P-201ENST00000384433 107 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 USP9YP11-201ENST00000427537 717 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 ANXA2P2-201ENST00000435128 1020 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC013403.1-201ENST00000436954 263 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 CACYBPP1-201ENST00000438592 684 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 RPL29P7-201ENST00000440227 457 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 DNAJA1P5-201ENST00000440278 943 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC027124.1-201ENST00000440852 466 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 YRDCP3-201ENST00000456507 480 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 USP9YP25-201ENST00000457708 443 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 PSAT1P4-201ENST00000466500 526 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC107015.1-201ENST00000466902 747 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC091860.1-201ENST00000505723 432 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC008868.1-201ENST00000509786 737 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 PRELID3BP4-201ENST00000515476 571 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AP001646.2-201ENST00000528645 1156 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 SS18L2P2-201ENST00000583960 235 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC015688.2-201ENST00000584523 262 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AC005479.3-201ENST00000602790 431 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL353778.1-201ENST00000603149 408 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 OR7A1P-202ENST00000641542 1158 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL136298.2-201ENST00000556497 1570 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 AL512353.3-201ENST00000417517 1326 ntBASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM55Q9BYV6 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 ENSAP3-201ENST00000312710 333 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 RNU6-1214P-201ENST00000363650 109 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 RNU6-1320P-201ENST00000390838 107 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 RNU6-1269P-201ENST00000391139 107 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 TCEA1P4-201ENST00000415066 844 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 AL008987.1-201ENST00000415528 237 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 ELOCP9-201ENST00000418624 239 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 OR7E117P-201ENST00000422682 1112 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 RAC1P8-201ENST00000427086 527 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 TXNL1P1-201ENST00000429528 554 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 AL604028.2-201ENST00000437848 788 ntBASIC6.92□□□□□ -1.3
TRIM55Q9BYV6 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms