Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.64□□□□□ -1.03
SCAPERQ9BY12 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 FBXL21-201ENST00000297158 1305 ntBASIC8.64□□□□□ -1.03
SCAPERQ9BY12 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.64□□□□□ -1.03
SCAPERQ9BY12 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 OR6D1P-201ENST00000436165 939 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AC073850.1-201ENST00000449243 255 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 HIGD1AP8-201ENST00000453927 274 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AC119674.1-217ENST00000641942 1086 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 PABPC1P8-201ENST00000452851 2086 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AC005034.3-201ENST00000604845 1747 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 LINC01616-201ENST00000561816 2280 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AL021877.2-201ENST00000624442 10684 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 DOCK11P1-201ENST00000553480 5932 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 RNA5SP305-201ENST00000362665 119 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 RN7SKP103-201ENST00000363848 320 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AC090142.2-201ENST00000483263 416 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AC074255.1-201ENST00000511259 501 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 MIR4301-201ENST00000577203 66 ntBASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.63□□□□□ -1.03
SCAPERQ9BY12 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AL133325.1-201ENST00000421090 382 ntBASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AL162739.1-201ENST00000450606 307 ntBASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AL022319.1-201ENST00000458183 1167 ntBASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 CR383656.6-201ENST00000550518 394 ntBASIC8.62□□□□□ -1.03
SCAPERQ9BY12 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 AC006116.3-201ENST00000592968 361 ntBASIC8.62□□□□□ -1.03
SCAPERQ9BY12 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SCAPERQ9BY12 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 RNU4-2-201ENST00000365668 141 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 AL389915.2-201ENST00000454576 441 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 AL603882.1-201ENST00000463059 681 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 FTH1P2-201ENST00000466086 412 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 RPS18P6-201ENST00000476880 458 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 OR51K1P-201ENST00000510214 950 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms