Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AP005902.2-201ENST00000518393 307 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC090826.1-203ENST00000569235 490 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 MIR4503-201ENST00000582187 83 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC098614.4-201ENST00000607601 462 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC019193.3-201ENST00000609144 554 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 SDR42E1P1-201ENST00000611327 477 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 MRPL57P3-201ENST00000619218 176 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 YWHAEP7-203ENST00000622054 312 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC120349.2-201ENST00000625002 298 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 NCOA4P4-201ENST00000513338 1861 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 HLF-208ENST00000573945 2977 ntTSL 5 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC145207.5-201ENST00000582866 2682 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 MAPK10-343ENST00000641677 2546 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC007382.1-201ENST00000624376 2618 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC016831.3-201ENST00000446451 1723 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC005154.1-215ENST00000584621 2437 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RNU6-560P-201ENST00000364007 108 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 snoZ40.1-201ENST00000364540 72 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RNU6-784P-201ENST00000384330 106 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC087752.1-201ENST00000391360 558 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RPS3AP23-201ENST00000401762 784 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 VIM2P-201ENST00000402383 1294 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 NCSTNP1-201ENST00000406229 144 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC009413.1-201ENST00000414823 399 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 FMO7P-201ENST00000436045 768 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AMYP1-201ENST00000440059 1023 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RPL21P133-201ENST00000443666 476 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 MTND1P9-201ENST00000453775 944 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 GTF2IP12-201ENST00000456547 356 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RN7SL492P-201ENST00000460700 295 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 PPIAP19-201ENST00000486414 492 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RN7SL388P-201ENST00000498736 339 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC019235.1-201ENST00000503847 207 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC008967.1-201ENST00000504843 163 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 NDUFB5P1-201ENST00000508134 564 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RNA5SP441-201ENST00000516809 88 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RN7SL366P-201ENST00000577957 292 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 GLUD1P8-201ENST00000585063 203 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 BNIP3P8-201ENST00000597863 560 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL132765.2-201ENST00000610812 351 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL133370.2-201ENST00000619934 439 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC022784.8-201ENST00000623764 559 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms