Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC018688.1-201ENST00000636528 1754 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 FAM3C2-201ENST00000312214 681 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 RNU6-757P-201ENST00000410334 100 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 GAPDHP51-201ENST00000426454 1000 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC009244.1-201ENST00000450566 258 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 MEF2AP1-201ENST00000454867 863 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 RN7SL180P-201ENST00000466769 294 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 RPS16P9-201ENST00000477220 427 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 RPL7P18-201ENST00000478965 734 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 RN7SKP283-201ENST00000517197 270 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC087808.1-201ENST00000520501 361 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC092709.1-201ENST00000521355 1045 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 OR4C2P-201ENST00000530855 1064 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC092865.1-201ENST00000544395 1023 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC027796.1-201ENST00000575593 512 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 NBR2-204ENST00000587322 63 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 PRR13P5-201ENST00000596581 442 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 NTAN1P1-201ENST00000603150 646 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC087894.3-201ENST00000623682 349 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 MIR665-201ENST00000635949 72 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 SMG1P7-201ENST00000565246 2704 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 AL161901.1-201ENST00000624954 3425 ntBASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRAIPQ9BWF2 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC005702.3-201ENST00000585345 1447 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 Z98755.1-201ENST00000407015 1384 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL442128.2-201ENST00000620246 1824 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 RNA5SP429-201ENST00000363688 109 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 MIR152-201ENST00000385212 87 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 RPL5P5-201ENST00000392009 893 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 CNN3P1-201ENST00000401596 935 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL450992.3-201ENST00000413192 568 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 MTND4LP17-201ENST00000414607 293 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms