Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
IFT140Q96RY7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.32□□□□□ -0.92
IFT140Q96RY7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
IFT140Q96RY7 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
IFT140Q96RY7 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
IFT140Q96RY7 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
IFT140Q96RY7 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 MFSD8-217ENST00000641178 4374 ntBASIC9.31□□□□□ -0.92
IFT140Q96RY7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 AC096775.1-201ENST00000437724 448 ntBASIC9.31□□□□□ -0.92
IFT140Q96RY7 NDUFA5P9-201ENST00000472609 340 ntBASIC9.31□□□□□ -0.92
IFT140Q96RY7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 AC009962.1-201ENST00000567327 3813 ntBASIC9.31□□□□□ -0.92
IFT140Q96RY7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
IFT140Q96RY7 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.31□□□□□ -0.92
IFT140Q96RY7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
IFT140Q96RY7 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
IFT140Q96RY7 LINC01616-201ENST00000561816 2280 ntBASIC9.31□□□□□ -0.92
IFT140Q96RY7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
IFT140Q96RY7 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
IFT140Q96RY7 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
IFT140Q96RY7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
IFT140Q96RY7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 AL353625.1-202ENST00000366273 571 ntBASIC9.3□□□□□ -0.92
IFT140Q96RY7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 AC091153.1-201ENST00000466297 402 ntBASIC9.3□□□□□ -0.92
IFT140Q96RY7 RN7SL481P-201ENST00000477764 299 ntBASIC9.3□□□□□ -0.92
IFT140Q96RY7 PDCL3P4-201ENST00000489621 720 ntBASIC9.3□□□□□ -0.92
IFT140Q96RY7 AL035690.1-201ENST00000490892 383 ntBASIC9.3□□□□□ -0.92
IFT140Q96RY7 AC090424.1-201ENST00000535243 736 ntBASIC9.3□□□□□ -0.92
IFT140Q96RY7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
IFT140Q96RY7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
IFT140Q96RY7 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
IFT140Q96RY7 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
IFT140Q96RY7 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 SNURFL-201ENST00000309296 343 ntBASIC9.29□□□□□ -0.92
IFT140Q96RY7 RN7SKP6-201ENST00000364795 319 ntBASIC9.29□□□□□ -0.92
IFT140Q96RY7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 SNORA16A-201ENST00000384342 137 ntBASIC9.29□□□□□ -0.92
IFT140Q96RY7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 RN7SKP126-201ENST00000411143 300 ntBASIC9.29□□□□□ -0.92
IFT140Q96RY7 AC073072.2-201ENST00000447425 348 ntBASIC9.29□□□□□ -0.92
IFT140Q96RY7 RPS23P2-201ENST00000463671 415 ntBASIC9.29□□□□□ -0.92
IFT140Q96RY7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 MIR132-201ENST00000591554 101 ntBASIC9.29□□□□□ -0.92
IFT140Q96RY7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
IFT140Q96RY7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 AC119674.1-213ENST00000641177 1386 ntBASIC9.29□□□□□ -0.92
IFT140Q96RY7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
IFT140Q96RY7 UGT2B27P-201ENST00000505092 1620 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 COX6B1P1-201ENST00000415962 213 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 COX6CP17-201ENST00000421389 185 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
IFT140Q96RY7 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AC079922.1-201ENST00000443291 359 ntBASIC9.28□□□□□ -0.92
IFT140Q96RY7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.28□□□□□ -0.92
IFT140Q96RY7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms