Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC016745.2-201ENST00000608834 3443 ntBASIC5.84□□□□□ -1.48
SNX18Q96RF0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SNX18Q96RF0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
SNX18Q96RF0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.48
SNX18Q96RF0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 CDY11P-201ENST00000447168 1651 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 RNA5SP382-201ENST00000363355 112 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 RN7SKP191-201ENST00000364713 306 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 RN7SKP161-201ENST00000411110 305 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 ARL2BPP3-201ENST00000421226 480 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AL606490.7-201ENST00000433136 191 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC009237.1-201ENST00000442127 744 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 MTND1P31-201ENST00000449206 961 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC104849.1-201ENST00000462623 405 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 UOX-201ENST00000471089 899 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC099340.1-201ENST00000475247 599 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 RN7SL836P-201ENST00000476140 296 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 RN7SL70P-201ENST00000478322 302 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 NACAP5-201ENST00000509863 636 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC093770.1-201ENST00000511559 571 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 NOP56P3-201ENST00000549457 385 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 HMGN2P47-201ENST00000559378 272 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC106730.2-201ENST00000566641 540 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 BNIP3P32-201ENST00000600015 554 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 RPS4XP21-201ENST00000603814 750 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 LSM1P2-201ENST00000604911 322 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC015849.2-201ENST00000605738 409 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 MIR6780B-201ENST00000610307 79 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 AC009159.2-201ENST00000617603 606 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SNX18Q96RF0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 TCP1P3-201ENST00000414406 1498 ntBASIC5.83□□□□□ -1.48
SNX18Q96RF0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX18Q96RF0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNX18Q96RF0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 AC004656.1-201ENST00000568479 4951 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX18Q96RF0 SNORD94-201ENST00000386037 137 ntBASIC5.82□□□□□ -1.48
SNX18Q96RF0 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms