Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC090826.1-203ENST00000569235 490 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 MIR3189-201ENST00000578735 73 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AP005136.2-201ENST00000583253 1049 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC084824.5-201ENST00000612009 413 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC253576.2-201ENST00000618815 580 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC025262.3-201ENST00000623666 360 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AL078595.2-201ENST00000605309 1780 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 HSPD1P8-201ENST00000400121 1658 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AC140479.2-201ENST00000421567 3130 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AL354854.1-201ENST00000455940 1363 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 RNA5SP433-201ENST00000364491 114 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 RPL23AP17-201ENST00000401064 499 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 Z83838.1-202ENST00000456225 839 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 MTND2P30-201ENST00000456663 382 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 RPL12P24-201ENST00000474907 486 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 RPL12P31-201ENST00000478433 450 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AC090543.1-201ENST00000492168 485 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 OR7E99P-201ENST00000505750 922 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 Y_RNA.710-201ENST00000516975 110 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AL671309.1-201ENST00000603750 544 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 HMGB1P51-201ENST00000605166 638 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AC092681.3-201ENST00000609463 678 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 MIR6778-201ENST00000617912 73 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AC104966.1-201ENST00000467010 1464 ntBASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CHMP4CQ96CF2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 OR10AB1P-202ENST00000641219 1686 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AL121835.1-201ENST00000404250 354 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 MIR1282-201ENST00000408865 101 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 SEPT7P8-201ENST00000413308 775 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC069154.1-201ENST00000432914 542 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC023141.3-201ENST00000436698 278 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 SOCS5P1-201ENST00000440415 949 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 RAB28P2-201ENST00000454299 641 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC138409.2-202ENST00000507274 458 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC008429.4-201ENST00000521201 182 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC036111.2-201ENST00000533247 901 ntBASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CHMP4CQ96CF2 AC007346.1-201ENST00000569208 867 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms