Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.81□□□□□ -1.32
HPS3Q969F9 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.81□□□□□ -1.32
HPS3Q969F9 AC090651.1-201ENST00000567865 634 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.81□□□□□ -1.32
HPS3Q969F9 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.81□□□□□ -1.32
HPS3Q969F9 SMIM12P1-201ENST00000603004 274 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC005828.7-201ENST00000607331 556 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AL359091.2-201ENST00000609303 556 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC025016.1-201ENST00000616746 682 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 AC097460.3-201ENST00000623099 442 ntBASIC6.81□□□□□ -1.32
HPS3Q969F9 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.81□□□□□ -1.32
HPS3Q969F9 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.81□□□□□ -1.32
HPS3Q969F9 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
HPS3Q969F9 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
HPS3Q969F9 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
HPS3Q969F9 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HPS3Q969F9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 CCNT2P1-201ENST00000423082 1315 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC027279.1-201ENST00000568885 4284 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.8□□□□□ -1.32
HPS3Q969F9 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.8□□□□□ -1.32
HPS3Q969F9 RN7SKP250-201ENST00000363924 321 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.8□□□□□ -1.32
HPS3Q969F9 YWHAZP6-201ENST00000399764 738 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AL451046.1-201ENST00000406097 534 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 RN7SKP151-201ENST00000410230 316 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 RNA5SP251-201ENST00000410614 137 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 RNU4-64P-201ENST00000410795 131 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC015977.1-201ENST00000418887 292 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 THEM7P-201ENST00000419556 672 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.8□□□□□ -1.32
HPS3Q969F9 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AL138899.2-201ENST00000439139 499 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.8□□□□□ -1.32
HPS3Q969F9 PPP1R11P1-201ENST00000486095 376 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC112484.3-201ENST00000505910 329 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC093770.1-201ENST00000511559 571 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC010374.2-201ENST00000512933 535 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 NPM1P21-201ENST00000513394 762 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC068339.2-201ENST00000534395 618 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC023310.2-201ENST00000553844 547 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.8□□□□□ -1.32
HPS3Q969F9 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 MIR4271-201ENST00000582451 67 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC005242.1-201ENST00000585658 438 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC015849.2-201ENST00000605738 409 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC141002.1-201ENST00000607025 279 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC097504.2-201ENST00000608088 454 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AL080312.2-201ENST00000613001 630 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 RFPL4AP6-201ENST00000616792 846 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AL645927.2-201ENST00000618350 349 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AL138955.1-201ENST00000622881 1040 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 AP000432.2-201ENST00000624164 2048 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.8□□□□□ -1.32
HPS3Q969F9 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 HSPA8P19-201ENST00000505359 1517 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC022164.1-201ENST00000568767 2673 ntBASIC6.8□□□□□ -1.32
HPS3Q969F9 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
HPS3Q969F9 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HPS3Q969F9 AC022325.1-201ENST00000502748 2199 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HPS3Q969F9 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
HPS3Q969F9 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
HPS3Q969F9 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HPS3Q969F9 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HPS3Q969F9 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
HPS3Q969F9 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.79□□□□□ -1.32
HPS3Q969F9 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HPS3Q969F9 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.79□□□□□ -1.32
HPS3Q969F9 AP000568.1-201ENST00000282964 442 ntBASIC6.79□□□□□ -1.32
HPS3Q969F9 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms