Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC090589.1-201ENST00000473109 362 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC108729.2-201ENST00000476543 840 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 TRAV31-201ENST00000502780 342 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 PCNAP1-201ENST00000505363 709 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 RN7SKP288-201ENST00000516227 268 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 SEC11B-201ENST00000518383 499 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC018926.1-201ENST00000616335 435 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC097655.1-201ENST00000635075 318 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AC022325.1-201ENST00000502748 2199 ntBASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.25□□□□□ -1.41
ATG4AQ8WYN0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 OR10R3P-201ENST00000361688 942 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 SNORD115-48-201ENST00000364764 76 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 RN7SKP166-201ENST00000410812 305 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 RN7SKP144-201ENST00000411108 279 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AL096829.1-201ENST00000413677 457 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 ARAFP1-201ENST00000422172 605 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC073410.1-201ENST00000435125 589 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 SDC4P-201ENST00000453285 601 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 RPL23AP40-201ENST00000487630 390 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC095052.1-201ENST00000509955 863 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AC138907.8-201ENST00000623981 2256 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 MTCO1P4-201ENST00000520516 1409 ntBASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ATG4AQ8WYN0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 CASC19-238ENST00000641523 1558 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 RNU105B-201ENST00000364478 208 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms