Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 AC096861.1-201ENST00000616652 240 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 RN7SKP78-201ENST00000364711 318 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 RNU1-136P-201ENST00000384181 164 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 RNA5SP156-201ENST00000410250 110 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 RPL12P12-201ENST00000424633 501 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 PFN1P8-201ENST00000497012 543 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC117500.1-201ENST00000497352 755 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 RNA5SP206-201ENST00000516703 121 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 TOMM20P1-201ENST00000534518 427 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC093524.1-201ENST00000564266 1094 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 TXNP4-201ENST00000575018 310 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC092944.2-201ENST00000605443 889 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC097641.3-201ENST00000613523 464 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 AC119674.1-217ENST00000641942 1086 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 FBXL21-201ENST00000297158 1305 ntBASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC112Q8NEF3 LINC01613-201ENST00000561476 2780 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 CASC19-246ENST00000641625 1606 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AC003985.2-201ENST00000562268 1669 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AL157702.1-201ENST00000398764 426 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 MIR1275-201ENST00000408770 80 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AC094019.1-201ENST00000434678 472 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 CXCR2P1-202ENST00000443392 1074 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 COX4I1P2-201ENST00000447446 547 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 CBX1P2-201ENST00000453841 458 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 OR7E22P-201ENST00000478335 1035 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 RPL34P33-201ENST00000486062 334 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 RPL37P23-201ENST00000492641 294 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AC011853.1-201ENST00000518911 454 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AC021269.1-201ENST00000526860 705 ntBASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC112Q8NEF3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC112Q8NEF3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC112Q8NEF3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC112Q8NEF3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC112Q8NEF3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
CCDC112Q8NEF3 ABCC13-202ENST00000463099 3842 ntBASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms