Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SOX4Q06945 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 OR5M2P-202ENST00000641241 4242 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX4Q06945 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SOX4Q06945 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SOX4Q06945 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 Y_RNA.88-201ENST00000363029 99 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX4Q06945 RNA5SP474-201ENST00000391234 90 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 MCTS2P-201ENST00000394552 546 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SOX4Q06945 AL589994.1-201ENST00000404962 340 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AL033519.1-201ENST00000407266 307 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 UBTFL2-201ENST00000411859 1191 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 USP9YP33-201ENST00000412220 421 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AL773545.3-201ENST00000414297 706 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 BX119321.1-201ENST00000428912 797 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AL121601.2-201ENST00000438019 707 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 AC092641.1-201ENST00000440229 772 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 GAPDHP20-201ENST00000444107 1007 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC005297.1-201ENST00000444765 862 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 ELOCP23-201ENST00000452014 332 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 AC005165.2-201ENST00000466070 380 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC015524.1-201ENST00000491585 472 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC069304.1-201ENST00000491593 704 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 PGBD4P4-201ENST00000509673 613 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 C1GALT1P3-201ENST00000522049 819 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 AC136619.2-201ENST00000563361 631 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC091304.4-201ENST00000565703 620 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX4Q06945 AC090286.3-201ENST00000573133 187 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC138207.8-204ENST00000579588 527 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.31□□□□□ -1.24
SOX4Q06945 AC087575.1-201ENST00000585087 229 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.31□□□□□ -1.24
SOX4Q06945 RN7SL622P-201ENST00000585292 275 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 RPL7AP69-201ENST00000595306 806 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.31□□□□□ -1.24
SOX4Q06945 AL606834.2-201ENST00000602954 668 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AL390877.1-201ENST00000605704 214 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX4Q06945 AC012676.3-201ENST00000614983 479 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX4Q06945 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SOX4Q06945 AC019080.5-201ENST00000624891 757 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX4Q06945 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SOX4Q06945 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.31□□□□□ -1.24
SOX4Q06945 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
SOX4Q06945 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 ZNF840P-201ENST00000504759 1996 ntBASIC7.31□□□□□ -1.24
SOX4Q06945 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SOX4Q06945 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.31□□□□□ -1.24
SOX4Q06945 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SOX4Q06945 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC138915.4-201ENST00000565549 4147 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SOX4Q06945 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC015871.3-201ENST00000618835 2261 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SOX4Q06945 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 AL158152.1-201ENST00000602652 1435 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX4Q06945 RPL12P13-201ENST00000310055 497 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SOX4Q06945 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms