Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CACNA1BQ00975 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 GNL2P1-201ENST00000451274 2190 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CACNA1BQ00975 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CACNA1BQ00975 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CACNA1BQ00975 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CACNA1BQ00975 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CACNA1BQ00975 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CACNA1BQ00975 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 RNU6-398P-201ENST00000384143 109 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 AC009480.2-201ENST00000422916 432 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 AC068287.1-201ENST00000430283 295 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 FTLP8-201ENST00000446770 267 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 AC053481.3-201ENST00000577881 843 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 AC022146.1-201ENST00000595307 847 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 AL513548.2-201ENST00000602994 1207 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 AL121890.2-201ENST00000617644 465 ntBASIC5.54□□□□□ -1.52
CACNA1BQ00975 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CACNA1BQ00975 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CACNA1BQ00975 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 AC108075.1-201ENST00000424692 529 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 AC106800.3-201ENST00000511389 308 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 RPL26P30-202ENST00000602923 645 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 CASC19-221ENST00000641309 1382 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 CASC19-228ENST00000641414 1684 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 RPL7P57-201ENST00000423238 740 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 AC008481.1-201ENST00000463278 396 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 RPS3AP15-201ENST00000483874 781 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 RN7SL591P-201ENST00000496150 292 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 SNORA70D-201ENST00000578836 135 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CACNA1BQ00975 AC137056.2-201ENST00000624055 1958 ntBASIC5.53□□□□□ -1.52
CACNA1BQ00975 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CACNA1BQ00975 AC114786.1-201ENST00000512892 1415 ntBASIC5.52□□□□□ -1.52
CACNA1BQ00975 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CACNA1BQ00975 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CACNA1BQ00975 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CACNA1BQ00975 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CACNA1BQ00975 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CACNA1BQ00975 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.52□□□□□ -1.53
CACNA1BQ00975 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 RPS15AP30-201ENST00000420976 390 ntBASIC5.52□□□□□ -1.53
CACNA1BQ00975 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CACNA1BQ00975 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.52□□□□□ -1.53
CACNA1BQ00975 AC016144.1-201ENST00000548175 1087 ntBASIC5.52□□□□□ -1.53
CACNA1BQ00975 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms