Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.82□□□□□ -1.48
RAE1P78406 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.82□□□□□ -1.48
RAE1P78406 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.82□□□□□ -1.48
RAE1P78406 AC244502.2-201ENST00000543361 851 ntBASIC5.82□□□□□ -1.48
RAE1P78406 AC093014.1-201ENST00000548926 724 ntBASIC5.82□□□□□ -1.48
RAE1P78406 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.82□□□□□ -1.48
RAE1P78406 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 AP001823.1-201ENST00000604056 1003 ntBASIC5.82□□□□□ -1.48
RAE1P78406 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.82□□□□□ -1.48
RAE1P78406 AC015819.1-201ENST00000613588 663 ntBASIC5.82□□□□□ -1.48
RAE1P78406 AC012676.3-201ENST00000614983 479 ntBASIC5.82□□□□□ -1.48
RAE1P78406 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 AC007603.3-201ENST00000636915 979 ntBASIC5.82□□□□□ -1.48
RAE1P78406 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RAE1P78406 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAE1P78406 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAE1P78406 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RAE1P78406 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RAE1P78406 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RAE1P78406 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
RAE1P78406 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
RAE1P78406 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RAE1P78406 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
RAE1P78406 AC022325.1-201ENST00000502748 2199 ntBASIC5.82□□□□□ -1.48
RAE1P78406 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RAE1P78406 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RAE1P78406 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.82□□□□□ -1.48
RAE1P78406 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.81□□□□□ -1.48
RAE1P78406 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.81□□□□□ -1.48
RAE1P78406 MAPK10-270ENST00000641102 3538 ntBASIC5.81□□□□□ -1.48
RAE1P78406 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.81□□□□□ -1.48
RAE1P78406 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 RNA5SP110-201ENST00000362638 115 ntBASIC5.81□□□□□ -1.48
RAE1P78406 GNG5P2-201ENST00000372054 207 ntBASIC5.81□□□□□ -1.48
RAE1P78406 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.81□□□□□ -1.48
RAE1P78406 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 PSMA6P1-201ENST00000400275 741 ntBASIC5.81□□□□□ -1.48
RAE1P78406 OR13Z1P-201ENST00000416141 834 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 MTCO1P51-201ENST00000427672 1060 ntBASIC5.81□□□□□ -1.48
RAE1P78406 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.81□□□□□ -1.48
RAE1P78406 IGLV3-4-201ENST00000432300 244 ntBASIC5.81□□□□□ -1.48
RAE1P78406 PTP4A1P3-201ENST00000433661 420 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AL512661.1-201ENST00000434586 1253 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AL645936.1-201ENST00000441979 518 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 RN7SL352P-201ENST00000466002 277 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 HMGB1P3-201ENST00000502802 616 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AC090958.1-201ENST00000511122 351 ntBASIC5.81□□□□□ -1.48
RAE1P78406 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.81□□□□□ -1.48
RAE1P78406 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.81□□□□□ -1.48
RAE1P78406 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.81□□□□□ -1.48
RAE1P78406 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.81□□□□□ -1.48
RAE1P78406 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.81□□□□□ -1.48
RAE1P78406 NOP56P3-201ENST00000549457 385 ntBASIC5.81□□□□□ -1.48
RAE1P78406 YWHAZP1-201ENST00000556286 722 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.81□□□□□ -1.48
RAE1P78406 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.81□□□□□ -1.48
RAE1P78406 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 AP005136.2-201ENST00000583253 1049 ntBASIC5.81□□□□□ -1.48
RAE1P78406 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 AC091057.3-201ENST00000602684 733 ntBASIC5.81□□□□□ -1.48
RAE1P78406 QTRT1P1-201ENST00000604344 1078 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.81□□□□□ -1.48
RAE1P78406 AC004801.6-201ENST00000616571 978 ntBASIC5.81□□□□□ -1.48
RAE1P78406 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 AC010325.3-201ENST00000641084 394 ntBASIC5.81□□□□□ -1.48
RAE1P78406 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.81□□□□□ -1.48
RAE1P78406 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.81□□□□□ -1.48
RAE1P78406 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RAE1P78406 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RAE1P78406 TCP1P3-201ENST00000414406 1498 ntBASIC5.81□□□□□ -1.48
RAE1P78406 Z83820.1-201ENST00000456978 1499 ntBASIC5.81□□□□□ -1.48
RAE1P78406 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RAE1P78406 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.81□□□□□ -1.48
RAE1P78406 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.81□□□□□ -1.48
RAE1P78406 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RAE1P78406 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RAE1P78406 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RAE1P78406 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 284.3 ms