Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.63□□□□□ -1.51
VSX2P58304 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.63□□□□□ -1.51
VSX2P58304 OR11H2-202ENST00000641517 1085 ntBASIC5.63□□□□□ -1.51
VSX2P58304 OR8G3P-202ENST00000641572 1255 ntBASIC5.63□□□□□ -1.51
VSX2P58304 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VSX2P58304 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 AL592429.1-201ENST00000403909 1473 ntBASIC5.63□□□□□ -1.51
VSX2P58304 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.63□□□□□ -1.51
VSX2P58304 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VSX2P58304 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VSX2P58304 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VSX2P58304 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VSX2P58304 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.63□□□□□ -1.51
VSX2P58304 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
VSX2P58304 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
VSX2P58304 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 AC139426.3-201ENST00000605648 2059 ntBASIC5.62□□□□□ -1.51
VSX2P58304 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
VSX2P58304 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
VSX2P58304 AC006600.2-201ENST00000624834 2506 ntBASIC5.62□□□□□ -1.51
VSX2P58304 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VSX2P58304 RNU11-201ENST00000387069 134 ntBASIC5.62□□□□□ -1.51
VSX2P58304 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VSX2P58304 AC092642.1-201ENST00000392417 425 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AL096800.1-201ENST00000405326 893 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.62□□□□□ -1.51
VSX2P58304 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.62□□□□□ -1.51
VSX2P58304 RPS12P17-201ENST00000438591 377 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AL512637.1-201ENST00000439523 1231 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AC023141.8-201ENST00000442554 208 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.62□□□□□ -1.51
VSX2P58304 AC073109.1-201ENST00000445066 978 ntBASIC5.62□□□□□ -1.51
VSX2P58304 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 AL603882.1-201ENST00000463059 681 ntBASIC5.62□□□□□ -1.51
VSX2P58304 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.62□□□□□ -1.51
VSX2P58304 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 AP000648.1-201ENST00000529682 397 ntBASIC5.62□□□□□ -1.51
VSX2P58304 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.62□□□□□ -1.51
VSX2P58304 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.62□□□□□ -1.51
VSX2P58304 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.62□□□□□ -1.51
VSX2P58304 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 AC008521.2-201ENST00000591021 259 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AL360012.1-201ENST00000602813 131 ntBASIC5.62□□□□□ -1.51
VSX2P58304 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.62□□□□□ -1.51
VSX2P58304 AL031601.1-201ENST00000605702 394 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AC145423.1-201ENST00000605712 336 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AL445670.1-201ENST00000618889 801 ntBASIC5.62□□□□□ -1.51
VSX2P58304 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.62□□□□□ -1.51
VSX2P58304 AC022164.1-201ENST00000568767 2673 ntBASIC5.62□□□□□ -1.51
VSX2P58304 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSX2P58304 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VSX2P58304 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 AL121835.1-201ENST00000404250 354 ntBASIC5.61□□□□□ -1.51
VSX2P58304 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.61□□□□□ -1.51
VSX2P58304 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.61□□□□□ -1.51
VSX2P58304 ZNF101P1-201ENST00000435701 1720 ntBASIC5.61□□□□□ -1.51
VSX2P58304 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 AC093166.4-201ENST00000457867 318 ntBASIC5.61□□□□□ -1.51
VSX2P58304 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 PSMA2P2-201ENST00000504319 686 ntBASIC5.61□□□□□ -1.51
VSX2P58304 SNORD46.2-201ENST00000516021 102 ntBASIC5.61□□□□□ -1.51
VSX2P58304 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.61□□□□□ -1.51
VSX2P58304 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.61□□□□□ -1.51
VSX2P58304 AC008429.4-201ENST00000521201 182 ntBASIC5.61□□□□□ -1.51
VSX2P58304 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.61□□□□□ -1.51
VSX2P58304 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.61□□□□□ -1.51
VSX2P58304 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VSX2P58304 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.61□□□□□ -1.51
VSX2P58304 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.61□□□□□ -1.51
VSX2P58304 HMGN2P47-201ENST00000559378 272 ntBASIC5.61□□□□□ -1.51
VSX2P58304 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.61□□□□□ -1.51
VSX2P58304 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
VSX2P58304 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.61□□□□□ -1.51
VSX2P58304 AC027243.2-201ENST00000602530 724 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms