Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH4P55283 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH4P55283 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH4P55283 AC015983.1-201ENST00000441577 373 ntBASIC5.98□□□□□ -1.45
CDH4P55283 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH4P55283 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH4P55283 AC079080.1-201ENST00000479841 822 ntBASIC5.98□□□□□ -1.45
CDH4P55283 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH4P55283 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 AC021733.2-201ENST00000518830 497 ntBASIC5.98□□□□□ -1.45
CDH4P55283 GTF2IP11-201ENST00000526931 420 ntBASIC5.98□□□□□ -1.45
CDH4P55283 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 AL121594.2-201ENST00000541658 472 ntBASIC5.98□□□□□ -1.45
CDH4P55283 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH4P55283 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH4P55283 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 AP003789.1-201ENST00000617737 605 ntBASIC5.98□□□□□ -1.45
CDH4P55283 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH4P55283 AC015689.2-201ENST00000528172 1738 ntBASIC5.98□□□□□ -1.45
CDH4P55283 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CDH4P55283 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CDH4P55283 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 FBXL21-201ENST00000297158 1305 ntBASIC5.98□□□□□ -1.45
CDH4P55283 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH4P55283 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH4P55283 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH4P55283 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 AL161756.3-201ENST00000641216 2071 ntBASIC5.97□□□□□ -1.45
CDH4P55283 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 ZNF101P1-201ENST00000435701 1720 ntBASIC5.97□□□□□ -1.45
CDH4P55283 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.97□□□□□ -1.45
CDH4P55283 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH4P55283 AP004289.1-201ENST00000436307 2205 ntBASIC5.97□□□□□ -1.45
CDH4P55283 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.97□□□□□ -1.45
CDH4P55283 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 RN7SKP186-201ENST00000365371 303 ntBASIC5.97□□□□□ -1.45
CDH4P55283 AL451142.1-201ENST00000375867 775 ntBASIC5.97□□□□□ -1.45
CDH4P55283 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 MTND6P12-201ENST00000428247 522 ntBASIC5.97□□□□□ -1.45
CDH4P55283 RPS3AP38-201ENST00000435889 763 ntBASIC5.97□□□□□ -1.45
CDH4P55283 UBFD1P1-201ENST00000473259 814 ntBASIC5.97□□□□□ -1.45
CDH4P55283 CR383656.1-201ENST00000484916 377 ntBASIC5.97□□□□□ -1.45
CDH4P55283 UGT2A3P7-201ENST00000510485 734 ntBASIC5.97□□□□□ -1.45
CDH4P55283 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH4P55283 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH4P55283 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH4P55283 IGLV3-30-201ENST00000524362 298 ntBASIC5.97□□□□□ -1.45
CDH4P55283 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH4P55283 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH4P55283 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.97□□□□□ -1.45
CDH4P55283 AP001496.3-201ENST00000580230 913 ntBASIC5.97□□□□□ -1.45
CDH4P55283 AC008521.2-201ENST00000591021 259 ntBASIC5.97□□□□□ -1.45
CDH4P55283 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH4P55283 AP005431.1-201ENST00000618479 319 ntBASIC5.97□□□□□ -1.45
CDH4P55283 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 AC022919.1-201ENST00000624979 626 ntBASIC5.97□□□□□ -1.45
CDH4P55283 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH4P55283 MAPK10-350ENST00000641777 965 ntBASIC5.97□□□□□ -1.45
CDH4P55283 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH4P55283 GTF2IP4-201ENST00000453092 2054 ntBASIC5.97□□□□□ -1.45
CDH4P55283 AC117409.1-201ENST00000470499 1310 ntBASIC5.97□□□□□ -1.45
CDH4P55283 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
CDH4P55283 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDH4P55283 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDH4P55283 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDH4P55283 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CDH4P55283 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDH4P55283 OR13C1P-202ENST00000641378 2919 ntBASIC5.96□□□□□ -1.45
CDH4P55283 OR4G1P-202ENST00000641173 1788 ntBASIC5.96□□□□□ -1.46
CDH4P55283 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CDH4P55283 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH4P55283 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDH4P55283 AL389925.1-201ENST00000432257 728 ntBASIC5.96□□□□□ -1.46
CDH4P55283 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH4P55283 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH4P55283 AC006539.1-201ENST00000481419 501 ntBASIC5.96□□□□□ -1.46
CDH4P55283 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH4P55283 snoU109.5-201ENST00000516231 132 ntBASIC5.96□□□□□ -1.46
CDH4P55283 AC078899.1-201ENST00000521432 1185 ntBASIC5.96□□□□□ -1.46
CDH4P55283 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH4P55283 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH4P55283 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH4P55283 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH4P55283 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.96□□□□□ -1.46
CDH4P55283 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH4P55283 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms