Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-5P52952 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-5P52952 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-5P52952 RN7SL815P-201ENST00000470970 290 ntBASIC4.8□□□□□ -1.64
NKX2-5P52952 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-5P52952 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-5P52952 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-5P52952 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-5P52952 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-5P52952 AC016559.1-201ENST00000511420 199 ntBASIC4.8□□□□□ -1.64
NKX2-5P52952 RNA5SP360-201ENST00000516555 118 ntBASIC4.8□□□□□ -1.64
NKX2-5P52952 SCARNA18.2-201ENST00000516882 84 ntBASIC4.8□□□□□ -1.64
NKX2-5P52952 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX2-5P52952 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-5P52952 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
NKX2-5P52952 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC4.8□□□□□ -1.64
NKX2-5P52952 RN7SL25P-201ENST00000583862 260 ntBASIC4.8□□□□□ -1.64
NKX2-5P52952 MIR4428-201ENST00000584884 73 ntBASIC4.8□□□□□ -1.64
NKX2-5P52952 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-5P52952 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-5P52952 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-5P52952 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-5P52952 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-5P52952 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-5P52952 AC120338.1-201ENST00000625074 1541 ntBASIC4.8□□□□□ -1.64
NKX2-5P52952 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-5P52952 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-5P52952 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX2-5P52952 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NKX2-5P52952 RBMY1HP-201ENST00000382759 1389 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AL359715.3-201ENST00000569267 2123 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-5P52952 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-5P52952 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-5P52952 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-5P52952 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-5P52952 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX2-5P52952 PPIAP24-201ENST00000328558 471 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 AL121886.1-201ENST00000358609 435 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 RNU1-49P-201ENST00000363468 159 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 RNA5SP211-201ENST00000365516 117 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC023141.1-201ENST00000419418 379 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 OR5M12P-201ENST00000423388 929 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 AC092066.1-201ENST00000425131 317 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-5P52952 RPL22P11-201ENST00000434894 385 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 RPS13P2-201ENST00000437890 455 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 ST13P2-201ENST00000438916 1109 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC092421.1-201ENST00000448148 418 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 AC090804.1-201ENST00000448870 490 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AL591473.1-201ENST00000464297 313 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 RPL7AP56-201ENST00000476420 791 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 HMGB1P19-201ENST00000517578 577 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.79□□□□□ -1.64
NKX2-5P52952 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC024940.3-201ENST00000538551 316 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-5P52952 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-5P52952 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-5P52952 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-5P52952 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.79□□□□□ -1.64
NKX2-5P52952 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.79□□□□□ -1.64
NKX2-5P52952 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 AC087893.2-201ENST00000623272 255 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX2-5P52952 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-5P52952 OR51H2P-202ENST00000641424 3046 ntBASIC4.79□□□□□ -1.64
NKX2-5P52952 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-5P52952 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-5P52952 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
NKX2-5P52952 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-5P52952 MTCO1P22-201ENST00000604619 1360 ntBASIC4.78□□□□□ -1.64
NKX2-5P52952 AL034370.1-201ENST00000397254 1590 ntBASIC4.78□□□□□ -1.64
NKX2-5P52952 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-5P52952 CASC19-238ENST00000641523 1558 ntBASIC4.78□□□□□ -1.64
NKX2-5P52952 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-5P52952 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
NKX2-5P52952 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms