Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC011504.1-201ENST00000623331 4103 ntBASIC6.19□□□□□ -1.42
BRCC3P46736 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCC3P46736 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BRCC3P46736 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCC3P46736 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.18□□□□□ -1.42
BRCC3P46736 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
BRCC3P46736 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCC3P46736 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
BRCC3P46736 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
BRCC3P46736 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCC3P46736 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.18□□□□□ -1.42
BRCC3P46736 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 RMRPP5-201ENST00000411156 267 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 NME1P1-201ENST00000420914 382 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 OR5W1P-201ENST00000423705 938 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 AK3P5-201ENST00000432033 519 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 FMO7P-201ENST00000436045 768 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 MRPS21P3-201ENST00000436696 262 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.18□□□□□ -1.42
BRCC3P46736 AC005297.1-201ENST00000444765 862 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCC3P46736 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.18□□□□□ -1.42
BRCC3P46736 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCC3P46736 AC004129.2-201ENST00000457229 287 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 AL445687.2-201ENST00000458156 728 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 AC074386.1-201ENST00000476560 767 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 RN7SL466P-201ENST00000497546 295 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 ATP5LP3-201ENST00000514223 304 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.18□□□□□ -1.42
BRCC3P46736 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCC3P46736 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.18□□□□□ -1.42
BRCC3P46736 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCC3P46736 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCC3P46736 AC096996.1-201ENST00000563813 325 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 AP003789.1-201ENST00000617737 605 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 AL691477.1-201ENST00000624398 162 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
BRCC3P46736 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCC3P46736 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCC3P46736 FBXL21-201ENST00000297158 1305 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 CIR1P2-201ENST00000514821 1342 ntBASIC6.18□□□□□ -1.42
BRCC3P46736 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
BRCC3P46736 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCC3P46736 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCC3P46736 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
BRCC3P46736 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCC3P46736 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRCC3P46736 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
BRCC3P46736 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 RARSP1-201ENST00000542842 1418 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
BRCC3P46736 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
BRCC3P46736 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 SNORA70H-201ENST00000383910 135 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 SNORA70J-201ENST00000384182 135 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.17□□□□□ -1.42
BRCC3P46736 AC015983.1-201ENST00000441577 373 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 CYCSP51-201ENST00000443545 318 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.17□□□□□ -1.42
BRCC3P46736 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.17□□□□□ -1.42
BRCC3P46736 AC090142.2-201ENST00000483263 416 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 RN7SL214P-201ENST00000487317 265 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 EIF3LP3-201ENST00000495197 822 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
BRCC3P46736 AC008429.4-201ENST00000521201 182 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 AL049872.1-201ENST00000556323 322 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.17□□□□□ -1.42
BRCC3P46736 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.17□□□□□ -1.42
BRCC3P46736 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
BRCC3P46736 AC008115.3-201ENST00000614874 549 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 AL355974.3-201ENST00000617383 467 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 CU639417.4-201ENST00000623928 207 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 AC018659.2-201ENST00000624690 715 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 YES1P1-201ENST00000418510 1628 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.17□□□□□ -1.42
BRCC3P46736 AP004289.1-201ENST00000436307 2205 ntBASIC6.17□□□□□ -1.42
BRCC3P46736 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRCC3P46736 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms