Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR6830-201ENST00000636015 70 ntBASIC6.03□□□□□ -1.44
HTTP42858 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HTTP42858 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HTTP42858 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC6.03□□□□□ -1.44
HTTP42858 NXF4-202ENST00000416098 1465 ntBASIC6.03□□□□□ -1.44
HTTP42858 AL596266.1-201ENST00000448132 400 ntBASIC6.03□□□□□ -1.44
HTTP42858 AC104634.1-201ENST00000452720 462 ntBASIC6.03□□□□□ -1.44
HTTP42858 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.03□□□□□ -1.44
HTTP42858 AC008147.3-201ENST00000548666 354 ntBASIC6.03□□□□□ -1.44
HTTP42858 BNIP3P5-201ENST00000562290 498 ntBASIC6.03□□□□□ -1.44
HTTP42858 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 AC011487.3-201ENST00000593607 453 ntBASIC6.03□□□□□ -1.44
HTTP42858 AC099494.2-201ENST00000623371 978 ntBASIC6.03□□□□□ -1.44
HTTP42858 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
HTTP42858 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC6.03□□□□□ -1.44
HTTP42858 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HTTP42858 SPATA31C1-201ENST00000420021 3895 ntBASIC6.03□□□□□ -1.44
HTTP42858 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HTTP42858 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HTTP42858 MIR134-201ENST00000385258 73 ntBASIC6.03□□□□□ -1.44
HTTP42858 U3.22-201ENST00000391120 215 ntBASIC6.03□□□□□ -1.44
HTTP42858 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.03□□□□□ -1.44
HTTP42858 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.03□□□□□ -1.44
HTTP42858 AL022319.1-201ENST00000458183 1167 ntBASIC6.03□□□□□ -1.44
HTTP42858 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.03□□□□□ -1.44
HTTP42858 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.03□□□□□ -1.44
HTTP42858 AL109766.1-201ENST00000555080 552 ntBASIC6.03□□□□□ -1.44
HTTP42858 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HTTP42858 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HTTP42858 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
HTTP42858 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HTTP42858 MT-RNR2-201ENST00000387347 1559 ntBASIC6.02□□□□□ -1.45
HTTP42858 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HTTP42858 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.02□□□□□ -1.45
HTTP42858 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 SNORA57.1-201ENST00000391227 145 ntBASIC6.02□□□□□ -1.45
HTTP42858 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.02□□□□□ -1.45
HTTP42858 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
HTTP42858 AC007346.2-201ENST00000564816 892 ntBASIC6.02□□□□□ -1.45
HTTP42858 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HTTP42858 AL161637.1-201ENST00000622380 412 ntBASIC6.02□□□□□ -1.45
HTTP42858 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.02□□□□□ -1.45
HTTP42858 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
HTTP42858 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HTTP42858 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC6.02□□□□□ -1.45
HTTP42858 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HTTP42858 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC6.02□□□□□ -1.45
HTTP42858 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HTTP42858 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.02□□□□□ -1.45
HTTP42858 MTCO1P1-201ENST00000624263 1081 ntBASIC6.02□□□□□ -1.45
HTTP42858 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.02□□□□□ -1.45
HTTP42858 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.02□□□□□ -1.45
HTTP42858 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HTTP42858 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 USP3-201ENST00000268049 5311 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.01□□□□□ -1.45
HTTP42858 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.01□□□□□ -1.45
HTTP42858 AC068287.1-201ENST00000430283 295 ntBASIC6.01□□□□□ -1.45
HTTP42858 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.01□□□□□ -1.45
HTTP42858 EIF2S2P2-201ENST00000447161 982 ntBASIC6.01□□□□□ -1.45
HTTP42858 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.01□□□□□ -1.45
HTTP42858 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.01□□□□□ -1.45
HTTP42858 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.01□□□□□ -1.45
HTTP42858 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.01□□□□□ -1.45
HTTP42858 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.01□□□□□ -1.45
HTTP42858 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 RN7SL356P-201ENST00000582228 248 ntBASIC6.01□□□□□ -1.45
HTTP42858 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.01□□□□□ -1.45
HTTP42858 MEMO1P5-201ENST00000604810 406 ntBASIC6.01□□□□□ -1.45
HTTP42858 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 AC091932.2-201ENST00000623014 291 ntBASIC6.01□□□□□ -1.45
HTTP42858 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 AC139713.2-214ENST00000642059 1811 ntBASIC6.01□□□□□ -1.45
HTTP42858 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 CDY5P-201ENST00000411487 1580 ntBASIC6.01□□□□□ -1.45
HTTP42858 CDY9P-201ENST00000451397 1580 ntBASIC6.01□□□□□ -1.45
HTTP42858 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms