Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC090286.3-201ENST00000573133 187 ntBASIC6.65□□□□□ -1.34
CIITAP33076 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CIITAP33076 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CIITAP33076 AC010615.3-201ENST00000597319 394 ntBASIC6.65□□□□□ -1.34
CIITAP33076 AC005014.3-201ENST00000605985 190 ntBASIC6.65□□□□□ -1.34
CIITAP33076 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CIITAP33076 AC107905.1-201ENST00000616204 426 ntBASIC6.65□□□□□ -1.34
CIITAP33076 AC243960.7-201ENST00000623532 707 ntBASIC6.65□□□□□ -1.34
CIITAP33076 SNX18P12-201ENST00000624821 759 ntBASIC6.65□□□□□ -1.34
CIITAP33076 AC022919.1-201ENST00000624979 626 ntBASIC6.65□□□□□ -1.34
CIITAP33076 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.65□□□□□ -1.34
CIITAP33076 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CIITAP33076 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CIITAP33076 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CIITAP33076 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CIITAP33076 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.65□□□□□ -1.35
CIITAP33076 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.65□□□□□ -1.35
CIITAP33076 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CIITAP33076 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
CIITAP33076 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 RNU1-59P-201ENST00000364829 162 ntBASIC6.64□□□□□ -1.35
CIITAP33076 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.64□□□□□ -1.35
CIITAP33076 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 RPS3P2-201ENST00000421346 701 ntBASIC6.64□□□□□ -1.35
CIITAP33076 IPPKP1-201ENST00000422501 768 ntBASIC6.64□□□□□ -1.35
CIITAP33076 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.64□□□□□ -1.35
CIITAP33076 MTND2P11-201ENST00000423638 648 ntBASIC6.64□□□□□ -1.35
CIITAP33076 RPS29P14-201ENST00000431518 171 ntBASIC6.64□□□□□ -1.35
CIITAP33076 KATNBL1P2-201ENST00000433311 835 ntBASIC6.64□□□□□ -1.35
CIITAP33076 RSL24D1P8-201ENST00000434442 492 ntBASIC6.64□□□□□ -1.35
CIITAP33076 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.64□□□□□ -1.35
CIITAP33076 AC073109.1-201ENST00000445066 978 ntBASIC6.64□□□□□ -1.35
CIITAP33076 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.64□□□□□ -1.35
CIITAP33076 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 RNU7-157P-201ENST00000459600 66 ntBASIC6.64□□□□□ -1.35
CIITAP33076 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 AC099521.1-201ENST00000482557 334 ntBASIC6.64□□□□□ -1.35
CIITAP33076 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CIITAP33076 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.64□□□□□ -1.35
CIITAP33076 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.64□□□□□ -1.35
CIITAP33076 AC007346.2-201ENST00000564816 892 ntBASIC6.64□□□□□ -1.35
CIITAP33076 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.64□□□□□ -1.35
CIITAP33076 AL713998.2-201ENST00000604538 1198 ntBASIC6.64□□□□□ -1.35
CIITAP33076 U1.25-201ENST00000614085 162 ntBASIC6.64□□□□□ -1.35
CIITAP33076 U1.34-201ENST00000618578 162 ntBASIC6.64□□□□□ -1.35
CIITAP33076 U1.31-201ENST00000620022 160 ntBASIC6.64□□□□□ -1.35
CIITAP33076 AC069234.4-201ENST00000621276 412 ntBASIC6.64□□□□□ -1.35
CIITAP33076 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.64□□□□□ -1.35
CIITAP33076 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CIITAP33076 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.64□□□□□ -1.35
CIITAP33076 AC091305.2-201ENST00000624049 1576 ntBASIC6.64□□□□□ -1.35
CIITAP33076 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 AC005225.5-201ENST00000623547 2225 ntBASIC6.64□□□□□ -1.35
CIITAP33076 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CIITAP33076 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.64□□□□□ -1.35
CIITAP33076 OR13C1P-202ENST00000641378 2919 ntBASIC6.63□□□□□ -1.35
CIITAP33076 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 AL589826.1-201ENST00000340697 249 ntBASIC6.63□□□□□ -1.35
CIITAP33076 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CIITAP33076 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 RPS3AP2-201ENST00000407190 754 ntBASIC6.63□□□□□ -1.35
CIITAP33076 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.63□□□□□ -1.35
CIITAP33076 AC245060.4-201ENST00000413293 1121 ntBASIC6.63□□□□□ -1.35
CIITAP33076 WDR95P-201ENST00000425638 1542 ntBASIC6.63□□□□□ -1.35
CIITAP33076 DEFA9P-201ENST00000433042 285 ntBASIC6.63□□□□□ -1.35
CIITAP33076 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 RPL23AP19-201ENST00000436229 369 ntBASIC6.63□□□□□ -1.35
CIITAP33076 AC096775.1-201ENST00000437724 448 ntBASIC6.63□□□□□ -1.35
CIITAP33076 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.63□□□□□ -1.35
CIITAP33076 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.63□□□□□ -1.35
CIITAP33076 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.63□□□□□ -1.35
CIITAP33076 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.63□□□□□ -1.35
CIITAP33076 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.63□□□□□ -1.35
CIITAP33076 AC007386.1-201ENST00000455212 582 ntBASIC6.63□□□□□ -1.35
CIITAP33076 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.63□□□□□ -1.35
CIITAP33076 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CIITAP33076 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
CIITAP33076 TRBV5-2-201ENST00000489095 273 ntBASIC6.63□□□□□ -1.35
CIITAP33076 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CIITAP33076 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms