Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL4A5P29400 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.7□□□□□ -1.34
COL4A5P29400 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A5P29400 RPL7L1P3-201ENST00000455249 689 ntBASIC6.7□□□□□ -1.34
COL4A5P29400 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.7□□□□□ -1.34
COL4A5P29400 RPL37AP8-201ENST00000494116 276 ntBASIC6.7□□□□□ -1.34
COL4A5P29400 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A5P29400 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL4A5P29400 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.7□□□□□ -1.34
COL4A5P29400 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.7□□□□□ -1.34
COL4A5P29400 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.7□□□□□ -1.34
COL4A5P29400 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A5P29400 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.7□□□□□ -1.34
COL4A5P29400 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.7□□□□□ -1.34
COL4A5P29400 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
COL4A5P29400 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
COL4A5P29400 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A5P29400 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A5P29400 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 ZNF733P-202ENST00000444809 1573 ntBASIC6.69□□□□□ -1.34
COL4A5P29400 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A5P29400 AC013442.1-201ENST00000397347 228 ntBASIC6.69□□□□□ -1.34
COL4A5P29400 AC007161.1-204ENST00000423039 460 ntBASIC6.69□□□□□ -1.34
COL4A5P29400 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL4A5P29400 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.69□□□□□ -1.34
COL4A5P29400 RNU1-88P-201ENST00000459274 128 ntBASIC6.69□□□□□ -1.34
COL4A5P29400 RPS23P2-201ENST00000463671 415 ntBASIC6.69□□□□□ -1.34
COL4A5P29400 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.69□□□□□ -1.34
COL4A5P29400 AC008745.1-201ENST00000604064 271 ntBASIC6.69□□□□□ -1.34
COL4A5P29400 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.69□□□□□ -1.34
COL4A5P29400 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
COL4A5P29400 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
COL4A5P29400 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
COL4A5P29400 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.69□□□□□ -1.34
COL4A5P29400 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL4A5P29400 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A5P29400 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A5P29400 RAB28P1-201ENST00000411517 641 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AC007568.1-201ENST00000422912 471 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 EIF2S2P3-201ENST00000428356 999 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC092324.1-201ENST00000468671 324 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 RN7SL459P-201ENST00000481078 302 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 HMGB1P40-201ENST00000525121 540 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 BRD9P1-201ENST00000529855 560 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.68□□□□□ -1.34
COL4A5P29400 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.68□□□□□ -1.34
COL4A5P29400 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A5P29400 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
COL4A5P29400 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A5P29400 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.68□□□□□ -1.34
COL4A5P29400 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A5P29400 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.68□□□□□ -1.34
COL4A5P29400 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL4A5P29400 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A5P29400 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A5P29400 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC126755.2-208ENST00000327792 462 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AC138969.1-213ENST00000331436 462 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms