Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.92□□□□□ -1.46
CDH3P22223 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CDH3P22223 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CDH3P22223 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 AC007342.9-201ENST00000623877 1385 ntBASIC5.92□□□□□ -1.46
CDH3P22223 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH3P22223 AC022325.1-201ENST00000502748 2199 ntBASIC5.91□□□□□ -1.46
CDH3P22223 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH3P22223 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH3P22223 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 LINC02019-201ENST00000608605 2060 ntBASIC5.91□□□□□ -1.46
CDH3P22223 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.91□□□□□ -1.46
CDH3P22223 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH3P22223 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 SNORA11.3-201ENST00000408471 128 ntBASIC5.91□□□□□ -1.46
CDH3P22223 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 AC009237.1-201ENST00000442127 744 ntBASIC5.91□□□□□ -1.46
CDH3P22223 NPM1P28-201ENST00000492269 840 ntBASIC5.91□□□□□ -1.46
CDH3P22223 RN7SL284P-201ENST00000498823 275 ntBASIC5.91□□□□□ -1.46
CDH3P22223 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH3P22223 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH3P22223 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 AC079905.1-201ENST00000549280 475 ntBASIC5.91□□□□□ -1.46
CDH3P22223 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH3P22223 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 AP001357.1-201ENST00000586304 1053 ntBASIC5.91□□□□□ -1.46
CDH3P22223 NPIPB1P-202ENST00000588786 828 ntBASIC5.91□□□□□ -1.46
CDH3P22223 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 AC067773.1-201ENST00000603284 1094 ntBASIC5.91□□□□□ -1.46
CDH3P22223 NF1P10-201ENST00000613227 742 ntBASIC5.91□□□□□ -1.46
CDH3P22223 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 SNORA11.6-201ENST00000619030 128 ntBASIC5.91□□□□□ -1.46
CDH3P22223 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 CASC19-238ENST00000641523 1558 ntBASIC5.91□□□□□ -1.46
CDH3P22223 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH3P22223 AC024587.1-201ENST00000505925 2157 ntBASIC5.91□□□□□ -1.46
CDH3P22223 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 CR383656.5-201ENST00000547616 1340 ntBASIC5.91□□□□□ -1.46
CDH3P22223 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH3P22223 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CDH3P22223 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 AC011815.2-201ENST00000618230 2021 ntBASIC5.91□□□□□ -1.46
CDH3P22223 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH3P22223 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH3P22223 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH3P22223 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH3P22223 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH3P22223 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH3P22223 CDC27P2-201ENST00000425026 1922 ntBASIC5.9□□□□□ -1.46
CDH3P22223 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
CDH3P22223 TET1P1-201ENST00000426627 2301 ntBASIC5.9□□□□□ -1.46
CDH3P22223 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH3P22223 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH3P22223 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDH3P22223 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH3P22223 RNA5SP375-201ENST00000362975 119 ntBASIC5.9□□□□□ -1.46
CDH3P22223 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDH3P22223 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH3P22223 RN7SKP161-201ENST00000411110 305 ntBASIC5.9□□□□□ -1.46
CDH3P22223 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH3P22223 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH3P22223 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH3P22223 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH3P22223 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH3P22223 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH3P22223 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH3P22223 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.9□□□□□ -1.46
CDH3P22223 DNAJA1P5-201ENST00000440278 943 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 247.5 ms