Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.43□□□□□ -1.22
NFKB1P19838 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.43□□□□□ -1.22
NFKB1P19838 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC7.43□□□□□ -1.22
NFKB1P19838 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
NFKB1P19838 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.43□□□□□ -1.22
NFKB1P19838 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 NCOA4P2-201ENST00000340589 1813 ntBASIC7.43□□□□□ -1.22
NFKB1P19838 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.43□□□□□ -1.22
NFKB1P19838 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NFKB1P19838 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.43□□□□□ -1.22
NFKB1P19838 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NFKB1P19838 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.42□□□□□ -1.22
NFKB1P19838 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NFKB1P19838 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 HSPD1P9-201ENST00000420325 1636 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC123769.2-201ENST00000624332 5984 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 RNU6-181P-201ENST00000363225 107 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 Y_RNA.554-201ENST00000384672 102 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 ARL4AP5-201ENST00000404372 599 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AL139098.1-201ENST00000407291 389 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 MIR1277-201ENST00000408536 78 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 RPS15AP38-201ENST00000413110 372 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 RPL21P108-201ENST00000413857 481 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 RPS7P13-201ENST00000413955 498 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 UBTFL3-201ENST00000418934 1024 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC023141.1-201ENST00000419418 379 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AC012498.1-201ENST00000424037 437 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 TRIM60P10Y-201ENST00000425589 751 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 TRIM60P8Y-201ENST00000436338 762 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AL662791.1-201ENST00000441992 928 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.42□□□□□ -1.22
NFKB1P19838 AL034418.1-201ENST00000448675 860 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 RPS20P4-201ENST00000461659 355 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 RN7SL791P-201ENST00000467868 295 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 RN7SL228P-201ENST00000470060 303 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AC090589.1-201ENST00000473109 362 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC113191.1-201ENST00000517759 403 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AP005639.2-201ENST00000527592 928 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AP003033.2-201ENST00000528901 805 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 OR11J2P-201ENST00000555298 907 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.42□□□□□ -1.22
NFKB1P19838 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NFKB1P19838 BMS1P7-201ENST00000602440 1052 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AC133552.5-201ENST00000604266 540 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AL592494.3-201ENST00000609485 464 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 FRG2MP-201ENST00000613317 856 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 MIR7844-201ENST00000616161 122 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AC006338.1-201ENST00000618453 749 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AC025048.6-202ENST00000627667 438 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 AL157786.1-207ENST00000627771 695 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.42□□□□□ -1.22
NFKB1P19838 AL590396.3-201ENST00000636334 300 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 MFSD8-245ENST00000641743 948 ntBASIC7.42□□□□□ -1.22
NFKB1P19838 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms