Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATF1P18846 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF1P18846 GUSBP9-201ENST00000510138 584 ntBASIC5.05□□□□□ -1.6
ATF1P18846 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF1P18846 RNA5SP441-201ENST00000516809 88 ntBASIC5.05□□□□□ -1.6
ATF1P18846 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.05□□□□□ -1.6
ATF1P18846 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATF1P18846 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF1P18846 AL078601.3-201ENST00000573303 535 ntBASIC5.05□□□□□ -1.6
ATF1P18846 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.05□□□□□ -1.6
ATF1P18846 TXNP4-201ENST00000575018 310 ntBASIC5.05□□□□□ -1.6
ATF1P18846 CCDC58P1-201ENST00000578567 430 ntBASIC5.05□□□□□ -1.6
ATF1P18846 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF1P18846 AC145423.1-201ENST00000605712 336 ntBASIC5.05□□□□□ -1.6
ATF1P18846 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ATF1P18846 AL162574.1-201ENST00000615702 950 ntBASIC5.05□□□□□ -1.6
ATF1P18846 FAM27E2-201ENST00000619668 403 ntBASIC5.05□□□□□ -1.6
ATF1P18846 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF1P18846 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.05□□□□□ -1.6
ATF1P18846 AC073488.6-201ENST00000632293 754 ntBASIC5.05□□□□□ -1.6
ATF1P18846 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ATF1P18846 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATF1P18846 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF1P18846 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATF1P18846 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATF1P18846 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.05□□□□□ -1.6
ATF1P18846 AC002525.1-201ENST00000624392 1622 ntBASIC5.05□□□□□ -1.6
ATF1P18846 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 MFSD8-219ENST00000641228 2559 ntBASIC5.04□□□□□ -1.6
ATF1P18846 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATF1P18846 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF1P18846 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 RPL35AP3-201ENST00000414680 288 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AL133482.1-201ENST00000415988 498 ntBASIC5.04□□□□□ -1.6
ATF1P18846 VN1R21P-201ENST00000426703 765 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AL136231.1-201ENST00000429407 730 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AC108479.1-201ENST00000431142 427 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF1P18846 RN7SL254P-201ENST00000460609 284 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF1P18846 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 RN7SL362P-201ENST00000494228 267 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AC113367.2-201ENST00000505749 160 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF1P18846 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF1P18846 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF1P18846 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 RN7SL230P-201ENST00000580835 303 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 NANOGP3-201ENST00000605855 286 ntBASIC5.04□□□□□ -1.6
ATF1P18846 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AL021918.2-201ENST00000613415 194 ntBASIC5.04□□□□□ -1.6
ATF1P18846 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 AL035661.1-201ENST00000620459 1144 ntBASIC5.04□□□□□ -1.6
ATF1P18846 AC021766.1-201ENST00000624404 741 ntBASIC5.04□□□□□ -1.6
ATF1P18846 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 AL357140.4-201ENST00000636827 412 ntBASIC5.04□□□□□ -1.6
ATF1P18846 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF1P18846 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF1P18846 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF1P18846 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF1P18846 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF1P18846 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF1P18846 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF1P18846 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
ATF1P18846 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF1P18846 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF1P18846 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF1P18846 SELENOWP1-201ENST00000322792 252 ntBASIC5.03□□□□□ -1.6
ATF1P18846 RN7SKP77-201ENST00000363261 353 ntBASIC5.03□□□□□ -1.6
ATF1P18846 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.03□□□□□ -1.6
ATF1P18846 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF1P18846 YWHAZP6-201ENST00000399764 738 ntBASIC5.03□□□□□ -1.6
ATF1P18846 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF1P18846 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF1P18846 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.03□□□□□ -1.6
ATF1P18846 AC117434.1-201ENST00000419971 836 ntBASIC5.03□□□□□ -1.6
ATF1P18846 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF1P18846 Z82198.3-201ENST00000421145 199 ntBASIC5.03□□□□□ -1.6
ATF1P18846 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms