Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL121835.1-201ENST00000404250 354 ntBASIC5.93□□□□□ -1.46
PCNAP12004 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.93□□□□□ -1.46
PCNAP12004 Z82198.3-201ENST00000421145 199 ntBASIC5.93□□□□□ -1.46
PCNAP12004 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 AC097359.1-201ENST00000447946 463 ntBASIC5.93□□□□□ -1.46
PCNAP12004 KF459542.1-201ENST00000450908 553 ntBASIC5.93□□□□□ -1.46
PCNAP12004 RAB28P2-201ENST00000454299 641 ntBASIC5.93□□□□□ -1.46
PCNAP12004 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.93□□□□□ -1.46
PCNAP12004 AC044810.1-201ENST00000480271 711 ntBASIC5.93□□□□□ -1.46
PCNAP12004 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 AC091544.1-201ENST00000484702 348 ntBASIC5.93□□□□□ -1.46
PCNAP12004 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.93□□□□□ -1.46
PCNAP12004 SNX18P25-201ENST00000510539 758 ntBASIC5.93□□□□□ -1.46
PCNAP12004 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.93□□□□□ -1.46
PCNAP12004 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.93□□□□□ -1.46
PCNAP12004 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.93□□□□□ -1.46
PCNAP12004 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.93□□□□□ -1.46
PCNAP12004 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.93□□□□□ -1.46
PCNAP12004 AC027334.1-201ENST00000603257 310 ntBASIC5.93□□□□□ -1.46
PCNAP12004 WBP1LP12-201ENST00000604449 331 ntBASIC5.93□□□□□ -1.46
PCNAP12004 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 AC015819.1-201ENST00000613588 663 ntBASIC5.93□□□□□ -1.46
PCNAP12004 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.93□□□□□ -1.46
PCNAP12004 AL590410.1-201ENST00000617925 333 ntBASIC5.93□□□□□ -1.46
PCNAP12004 FO681491.1-202ENST00000623392 737 ntBASIC5.93□□□□□ -1.46
PCNAP12004 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.93□□□□□ -1.46
PCNAP12004 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
PCNAP12004 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.93□□□□□ -1.46
PCNAP12004 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PCNAP12004 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.92□□□□□ -1.46
PCNAP12004 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
PCNAP12004 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCNAP12004 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.92□□□□□ -1.46
PCNAP12004 RN7SKP146-201ENST00000410242 334 ntBASIC5.92□□□□□ -1.46
PCNAP12004 CBX1P3-201ENST00000413296 527 ntBASIC5.92□□□□□ -1.46
PCNAP12004 RPL7AP51-201ENST00000422016 760 ntBASIC5.92□□□□□ -1.46
PCNAP12004 AC016027.5-201ENST00000427227 210 ntBASIC5.92□□□□□ -1.46
PCNAP12004 RPSAP32-201ENST00000432681 526 ntBASIC5.92□□□□□ -1.46
PCNAP12004 AC013403.1-201ENST00000436954 263 ntBASIC5.92□□□□□ -1.46
PCNAP12004 OR3D1P-201ENST00000438288 955 ntBASIC5.92□□□□□ -1.46
PCNAP12004 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.92□□□□□ -1.46
PCNAP12004 OR52I1-201ENST00000450052 1050 ntBASIC5.92□□□□□ -1.46
PCNAP12004 RN7SL552P-201ENST00000462094 276 ntBASIC5.92□□□□□ -1.46
PCNAP12004 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.92□□□□□ -1.46
PCNAP12004 RN7SL352P-201ENST00000466002 277 ntBASIC5.92□□□□□ -1.46
PCNAP12004 RPL34P33-201ENST00000486062 334 ntBASIC5.92□□□□□ -1.46
PCNAP12004 AC114728.1-201ENST00000488289 483 ntBASIC5.92□□□□□ -1.46
PCNAP12004 RPS27P20-201ENST00000492051 246 ntBASIC5.92□□□□□ -1.46
PCNAP12004 HMGN1P16-201ENST00000508308 283 ntBASIC5.92□□□□□ -1.46
PCNAP12004 AC095052.1-201ENST00000509955 863 ntBASIC5.92□□□□□ -1.46
PCNAP12004 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.92□□□□□ -1.46
PCNAP12004 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.92□□□□□ -1.46
PCNAP12004 OR10D4P-201ENST00000525892 951 ntBASIC5.92□□□□□ -1.46
PCNAP12004 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 AC005000.1-201ENST00000536192 288 ntBASIC5.92□□□□□ -1.46
PCNAP12004 BTG1P1-201ENST00000540396 508 ntBASIC5.92□□□□□ -1.46
PCNAP12004 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.92□□□□□ -1.46
PCNAP12004 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 MIR132-201ENST00000591554 101 ntBASIC5.92□□□□□ -1.46
PCNAP12004 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
PCNAP12004 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.92□□□□□ -1.46
PCNAP12004 AC008555.7-201ENST00000605008 583 ntBASIC5.92□□□□□ -1.46
PCNAP12004 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.92□□□□□ -1.46
PCNAP12004 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.92□□□□□ -1.46
PCNAP12004 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PCNAP12004 AC010325.3-201ENST00000641084 394 ntBASIC5.92□□□□□ -1.46
PCNAP12004 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.92□□□□□ -1.46
PCNAP12004 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.92□□□□□ -1.46
PCNAP12004 CUL4AP1-201ENST00000514750 1863 ntBASIC5.92□□□□□ -1.46
PCNAP12004 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
PCNAP12004 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCNAP12004 AC016745.2-201ENST00000608834 3443 ntBASIC5.92□□□□□ -1.46
PCNAP12004 MRRFP1-201ENST00000435941 1675 ntBASIC5.91□□□□□ -1.46
PCNAP12004 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCNAP12004 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.91□□□□□ -1.46
PCNAP12004 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PCNAP12004 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms