Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AC027279.4-201ENST00000624371 2072 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 SNRPEP6-201ENST00000407465 277 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 RN7SKP146-201ENST00000410242 334 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 RPS4XP12-201ENST00000461747 709 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 OR11I1P-201ENST00000486033 954 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC113367.2-201ENST00000505749 160 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC090826.1-203ENST00000569235 490 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AL078601.3-201ENST00000573303 535 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC027216.1-201ENST00000577726 685 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 MIR4701-201ENST00000583094 63 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 WBP1LP12-201ENST00000604449 331 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AL512652.1-201ENST00000619006 500 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 AC104260.2-201ENST00000623551 3497 ntBASIC6.37□□□□□ -1.39
CCDC172P0C7W6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC172P0C7W6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC138907.8-201ENST00000623981 2256 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MIR191-201ENST00000384873 92 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 RN7SKP108-201ENST00000411367 328 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AL445928.1-201ENST00000435545 222 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 RPS7P3-201ENST00000443360 580 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 KF459542.1-201ENST00000450908 553 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC008629.2-201ENST00000503783 483 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 PRMT5P1-201ENST00000514351 598 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MRPS5P3-201ENST00000515577 166 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 RNU6-513P-201ENST00000516104 104 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MRPS21P8-201ENST00000569196 235 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 SMIM12P1-201ENST00000603004 274 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 NANOGP3-201ENST00000605855 286 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 AC093591.2-201ENST00000565254 3843 ntBASIC6.36□□□□□ -1.39
CCDC172P0C7W6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC172P0C7W6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC172P0C7W6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCDC172P0C7W6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC172P0C7W6 AL034546.1-201ENST00000623740 3693 ntBASIC6.35□□□□□ -1.39
CCDC172P0C7W6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC172P0C7W6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCDC172P0C7W6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC172P0C7W6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms