Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC4P09017 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC4P09017 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC4P09017 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HOXC4P09017 AC068769.1-201ENST00000474767 2426 ntBASIC5.73□□□□□ -1.49
HOXC4P09017 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC4P09017 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXC4P09017 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
HOXC4P09017 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 AL451046.1-201ENST00000406097 534 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 OR2AT2P-201ENST00000413438 905 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.72□□□□□ -1.49
HOXC4P09017 AL121776.1-201ENST00000429337 372 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC4P09017 AL365220.1-201ENST00000432923 399 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 HMGB3P24-201ENST00000433260 622 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXC4P09017 Z84478.1-201ENST00000438230 1219 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 AL390879.1-201ENST00000439143 386 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 AC005297.1-201ENST00000444765 862 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 RPS23P6-201ENST00000466136 431 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HOXC4P09017 AC009120.1-201ENST00000493458 473 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 AC074087.1-201ENST00000512059 724 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 RN7SKP248-201ENST00000516278 305 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.72□□□□□ -1.49
HOXC4P09017 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC4P09017 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC4P09017 AC022404.1-201ENST00000555320 273 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXC4P09017 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.72□□□□□ -1.49
HOXC4P09017 MIR6768-201ENST00000610734 72 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXC4P09017 CU639417.4-201ENST00000623928 207 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 AC007683.2-201ENST00000624681 714 ntBASIC5.72□□□□□ -1.49
HOXC4P09017 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXC4P09017 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HOXC4P09017 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXC4P09017 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC4P09017 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC4P09017 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC4P09017 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.71□□□□□ -1.49
HOXC4P09017 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC4P09017 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HOXC4P09017 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
HOXC4P09017 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HOXC4P09017 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC4P09017 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HOXC4P09017 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC4P09017 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
HOXC4P09017 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC4P09017 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC4P09017 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC4P09017 AL159987.1-201ENST00000347911 293 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 RPL23AP17-201ENST00000401064 499 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC4P09017 YWHAEP1-201ENST00000453697 763 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 OSTCP1-201ENST00000455507 450 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 OR7E157P-201ENST00000494376 911 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 AL136038.1-201ENST00000497246 351 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HOXC4P09017 AC138866.2-201ENST00000508650 584 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 SNORA43.3-201ENST00000517240 103 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 IGLV3-30-201ENST00000524362 298 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC4P09017 HNRNPCP1-201ENST00000556181 766 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC4P09017 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC4P09017 AC096996.1-201ENST00000563813 325 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HOXC4P09017 MIR4505-201ENST00000582238 73 ntBASIC5.71□□□□□ -1.5
HOXC4P09017 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC4P09017 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms