Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNRPGP1-201ENST00000553864 222 ntBASIC6.5□□□□□ -1.37
MMP3P08254 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP3P08254 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.5□□□□□ -1.37
MMP3P08254 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
MMP3P08254 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP3P08254 AC010615.3-201ENST00000597319 394 ntBASIC6.5□□□□□ -1.37
MMP3P08254 SUMO2P15-201ENST00000604285 278 ntBASIC6.5□□□□□ -1.37
MMP3P08254 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.5□□□□□ -1.37
MMP3P08254 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.5□□□□□ -1.37
MMP3P08254 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 MIR6719-201ENST00000622428 87 ntBASIC6.5□□□□□ -1.37
MMP3P08254 AC004836.1-201ENST00000623032 634 ntBASIC6.5□□□□□ -1.37
MMP3P08254 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 MRE11P1-201ENST00000464884 2127 ntBASIC6.5□□□□□ -1.37
MMP3P08254 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.5□□□□□ -1.37
MMP3P08254 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MMP3P08254 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
MMP3P08254 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.5□□□□□ -1.37
MMP3P08254 LINC02019-201ENST00000608605 2060 ntBASIC6.49□□□□□ -1.37
MMP3P08254 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.49□□□□□ -1.37
MMP3P08254 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.49□□□□□ -1.37
MMP3P08254 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.49□□□□□ -1.37
MMP3P08254 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.49□□□□□ -1.37
MMP3P08254 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.49□□□□□ -1.37
MMP3P08254 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.49□□□□□ -1.37
MMP3P08254 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MMP3P08254 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MMP3P08254 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.49□□□□□ -1.37
MMP3P08254 TMA16P2-201ENST00000413187 601 ntBASIC6.49□□□□□ -1.37
MMP3P08254 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.49□□□□□ -1.37
MMP3P08254 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.49□□□□□ -1.37
MMP3P08254 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.49□□□□□ -1.37
MMP3P08254 AC012075.1-201ENST00000436549 580 ntBASIC6.49□□□□□ -1.37
MMP3P08254 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.49□□□□□ -1.37
MMP3P08254 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 AL049829.1-201ENST00000465411 156 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AC115223.1-201ENST00000466377 870 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AL133445.1-201ENST00000467051 452 ntBASIC6.49□□□□□ -1.37
MMP3P08254 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.49□□□□□ -1.37
MMP3P08254 AC006539.1-201ENST00000481419 501 ntBASIC6.49□□□□□ -1.37
MMP3P08254 RN7SL184P-201ENST00000488308 297 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AC096754.1-201ENST00000508904 818 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AC008429.4-201ENST00000521201 182 ntBASIC6.49□□□□□ -1.37
MMP3P08254 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.49□□□□□ -1.37
MMP3P08254 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.49□□□□□ -1.37
MMP3P08254 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.49□□□□□ -1.37
MMP3P08254 AC015849.6-201ENST00000605454 474 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AL391597.1-201ENST00000618707 694 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AC069234.4-201ENST00000621276 412 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AC007683.2-201ENST00000624681 714 ntBASIC6.49□□□□□ -1.37
MMP3P08254 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 AL589993.1-201ENST00000407450 2524 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AL121768.1-201ENST00000613917 2544 ntBASIC6.49□□□□□ -1.37
MMP3P08254 AC112243.1-201ENST00000623949 3851 ntBASIC6.49□□□□□ -1.37
MMP3P08254 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
MMP3P08254 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MMP3P08254 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.48□□□□□ -1.37
MMP3P08254 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.48□□□□□ -1.37
MMP3P08254 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
MMP3P08254 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.48□□□□□ -1.37
MMP3P08254 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 AL159987.1-201ENST00000347911 293 ntBASIC6.48□□□□□ -1.37
MMP3P08254 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
MMP3P08254 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.48□□□□□ -1.37
MMP3P08254 RPS21P8-201ENST00000413365 247 ntBASIC6.48□□□□□ -1.37
MMP3P08254 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.48□□□□□ -1.37
MMP3P08254 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.48□□□□□ -1.37
MMP3P08254 AC015977.1-201ENST00000418887 292 ntBASIC6.48□□□□□ -1.37
MMP3P08254 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP3P08254 AC113412.1-201ENST00000425840 504 ntBASIC6.48□□□□□ -1.37
MMP3P08254 HMGB1P32-201ENST00000425971 565 ntBASIC6.48□□□□□ -1.37
MMP3P08254 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.48□□□□□ -1.37
MMP3P08254 AK3P5-201ENST00000432033 519 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms