Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
COL5A2P05997 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
COL5A2P05997 RNU1-88P-201ENST00000459274 128 ntBASIC7.44□□□□□ -1.22
COL5A2P05997 IGLV2-34-201ENST00000490007 283 ntBASIC7.44□□□□□ -1.22
COL5A2P05997 AC109462.1-201ENST00000491087 368 ntBASIC7.44□□□□□ -1.22
COL5A2P05997 RN7SL591P-201ENST00000496150 292 ntBASIC7.44□□□□□ -1.22
COL5A2P05997 RNU6-941P-201ENST00000516346 108 ntBASIC7.44□□□□□ -1.22
COL5A2P05997 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.44□□□□□ -1.22
COL5A2P05997 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.44□□□□□ -1.22
COL5A2P05997 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 HYDIN2-203ENST00000614586 13885 ntBASIC7.44□□□□□ -1.22
COL5A2P05997 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
COL5A2P05997 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL5A2P05997 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
COL5A2P05997 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
COL5A2P05997 AC123769.2-201ENST00000624332 5984 ntBASIC7.44□□□□□ -1.22
COL5A2P05997 RN7SKP104-201ENST00000362605 328 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 RN7SKP103-201ENST00000363848 320 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 SNORA67-201ENST00000384423 137 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.43□□□□□ -1.22
COL5A2P05997 AC105399.1-202ENST00000447303 205 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 RPS23P2-201ENST00000463671 415 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 AC068522.1-201ENST00000482895 345 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 AC013701.1-201ENST00000522657 465 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.43□□□□□ -1.22
COL5A2P05997 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.43□□□□□ -1.22
COL5A2P05997 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.43□□□□□ -1.22
COL5A2P05997 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 AC069307.1-201ENST00000602820 447 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 AC109583.2-201ENST00000617367 129 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL5A2P05997 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.43□□□□□ -1.22
COL5A2P05997 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
COL5A2P05997 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
COL5A2P05997 ZNF101P1-201ENST00000435701 1720 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.43□□□□□ -1.22
COL5A2P05997 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 PWAR1-201ENST00000624188 2414 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL5A2P05997 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL5A2P05997 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.43□□□□□ -1.22
COL5A2P05997 AC090114.3-201ENST00000479267 829 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.43□□□□□ -1.22
COL5A2P05997 OR51A1P-201ENST00000511110 946 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.43□□□□□ -1.22
COL5A2P05997 RN7SKP99-201ENST00000517028 307 ntBASIC7.43□□□□□ -1.22
COL5A2P05997 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.43□□□□□ -1.22
COL5A2P05997 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL5A2P05997 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.43□□□□□ -1.22
COL5A2P05997 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.43□□□□□ -1.22
COL5A2P05997 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.43□□□□□ -1.22
COL5A2P05997 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL5A2P05997 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
COL5A2P05997 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.42□□□□□ -1.22
COL5A2P05997 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.42□□□□□ -1.22
COL5A2P05997 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL5A2P05997 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
COL5A2P05997 AC009831.5-201ENST00000624000 3189 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
COL5A2P05997 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
COL5A2P05997 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.42□□□□□ -1.22
COL5A2P05997 SNORA16A-201ENST00000384342 137 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 TMA16P2-201ENST00000413187 601 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.42□□□□□ -1.22
COL5A2P05997 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.42□□□□□ -1.22
COL5A2P05997 RBMY2QP-201ENST00000429799 1147 ntBASIC7.42□□□□□ -1.22
COL5A2P05997 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms