Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RN7SKP29-201ENST00000410957 272 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 RPS4XP5-201ENST00000419038 768 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.35□□□□□ -1.55
SPTA1P02549 TPT1P13-201ENST00000449760 499 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 AL389915.2-201ENST00000454576 441 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 RN7SL604P-201ENST00000492589 296 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 AC147055.3-201ENST00000510547 851 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.35□□□□□ -1.55
SPTA1P02549 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.35□□□□□ -1.55
SPTA1P02549 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.35□□□□□ -1.55
SPTA1P02549 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 AC011455.2-201ENST00000599320 3336 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SPTA1P02549 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SPTA1P02549 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.35□□□□□ -1.55
SPTA1P02549 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC5.35□□□□□ -1.55
SPTA1P02549 AC089998.1-201ENST00000548575 3141 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 NEK2P4-201ENST00000425793 1329 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 AL512310.3-201ENST00000547023 1335 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 SNORA11.2-201ENST00000408318 127 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.35□□□□□ -1.55
SPTA1P02549 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.35□□□□□ -1.55
SPTA1P02549 CYP4F30P-202ENST00000420048 405 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.35□□□□□ -1.55
SPTA1P02549 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.35□□□□□ -1.55
SPTA1P02549 ATP5J2P6-201ENST00000565203 266 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.35□□□□□ -1.55
SPTA1P02549 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 AP001541.1-201ENST00000623322 1904 ntBASIC5.35□□□□□ -1.55
SPTA1P02549 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SPTA1P02549 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SPTA1P02549 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SPTA1P02549 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
SPTA1P02549 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC5.34□□□□□ -1.55
SPTA1P02549 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.34□□□□□ -1.55
SPTA1P02549 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.34□□□□□ -1.55
SPTA1P02549 RNA5SP183-201ENST00000362452 119 ntBASIC5.34□□□□□ -1.55
SPTA1P02549 COX6CP17-201ENST00000421389 185 ntBASIC5.34□□□□□ -1.55
SPTA1P02549 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.34□□□□□ -1.55
SPTA1P02549 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.34□□□□□ -1.55
SPTA1P02549 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.34□□□□□ -1.55
SPTA1P02549 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.34□□□□□ -1.55
SPTA1P02549 MIR3189-201ENST00000578735 73 ntBASIC5.34□□□□□ -1.55
SPTA1P02549 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
SPTA1P02549 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.34□□□□□ -1.55
SPTA1P02549 AC141002.1-201ENST00000607025 279 ntBASIC5.34□□□□□ -1.55
SPTA1P02549 AC012414.7-202ENST00000622705 1090 ntBASIC5.34□□□□□ -1.55
SPTA1P02549 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SPTA1P02549 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
SPTA1P02549 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.34□□□□□ -1.55
SPTA1P02549 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SPTA1P02549 CTAGE11P-201ENST00000451540 2353 ntBASIC5.34□□□□□ -1.55
SPTA1P02549 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SPTA1P02549 MFSD8-219ENST00000641228 2559 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
SPTA1P02549 RN7SKP77-201ENST00000363261 353 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SPTA1P02549 RPL7P56-201ENST00000429441 717 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AC126120.1-201ENST00000431082 470 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AURKAPS1-201ENST00000451805 1212 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.34□□□□□ -1.56
SPTA1P02549 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.34□□□□□ -1.56
SPTA1P02549 RPL35AP19-201ENST00000469425 329 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AC105233.1-201ENST00000498840 781 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.34□□□□□ -1.56
SPTA1P02549 HMGB1P23-201ENST00000518743 568 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.34□□□□□ -1.56
SPTA1P02549 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.34□□□□□ -1.56
SPTA1P02549 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.34□□□□□ -1.56
SPTA1P02549 GARSP1-201ENST00000570895 719 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.34□□□□□ -1.56
SPTA1P02549 AC119403.2-201ENST00000590960 598 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AL953862.2-201ENST00000603089 820 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AC139493.1-201ENST00000604368 397 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 AC005840.5-201ENST00000619166 599 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.34□□□□□ -1.56
SPTA1P02549 AC011815.2-201ENST00000618230 2021 ntBASIC5.34□□□□□ -1.56
SPTA1P02549 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SPTA1P02549 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SPTA1P02549 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.34□□□□□ -1.56
SPTA1P02549 TNPO1P2-201ENST00000426249 2665 ntBASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms