Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC126615.2-201ENST00000553003 515 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC138207.8-204ENST00000579588 527 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 SYPL1P2-201ENST00000582878 727 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC010615.3-201ENST00000597319 394 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 AC100814.1-201ENST00000606963 623 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 FAM72A-208ENST00000607379 1139 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 AL589743.6-201ENST00000611025 117 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 MIR6133-201ENST00000617057 108 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 AC089999.3-201ENST00000622440 577 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 AL031595.2-201ENST00000624215 19071 ntBASIC5.6□□□□□ -1.51
CLPTM1O96005 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLPTM1O96005 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLPTM1O96005 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.6□□□□□ -1.51
CLPTM1O96005 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.59□□□□□ -1.51
CLPTM1O96005 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.59□□□□□ -1.51
CLPTM1O96005 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.59□□□□□ -1.51
CLPTM1O96005 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.59□□□□□ -1.51
CLPTM1O96005 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLPTM1O96005 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 SNORA70.6-201ENST00000383934 134 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 RPL11P3-201ENST00000395256 523 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 MTND3P20-201ENST00000407663 186 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.59□□□□□ -1.51
CLPTM1O96005 GPN3P1-201ENST00000423883 535 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.59□□□□□ -1.51
CLPTM1O96005 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.59□□□□□ -1.51
CLPTM1O96005 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC010240.2-201ENST00000445363 1205 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 AC068491.1-201ENST00000449539 1241 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 FRG2FP-204ENST00000453982 852 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.59□□□□□ -1.51
CLPTM1O96005 RPS7P10-201ENST00000464254 603 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.59□□□□□ -1.51
CLPTM1O96005 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 RPL9P15-201ENST00000491096 532 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC087272.1-201ENST00000523624 533 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.59□□□□□ -1.51
CLPTM1O96005 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.59□□□□□ -1.51
CLPTM1O96005 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC025283.1-201ENST00000572039 734 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.59□□□□□ -1.51
CLPTM1O96005 WBP1LP11-201ENST00000586141 328 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
CLPTM1O96005 AC004805.3-201ENST00000603178 310 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 NDUFB9P1-201ENST00000604683 510 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 AL133481.2-203ENST00000607558 139 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 AC239803.2-201ENST00000610161 430 ntBASIC5.59□□□□□ -1.51
CLPTM1O96005 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.59□□□□□ -1.51
CLPTM1O96005 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLPTM1O96005 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.59□□□□□ -1.51
CLPTM1O96005 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.59□□□□□ -1.51
CLPTM1O96005 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLPTM1O96005 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.59□□□□□ -1.51
CLPTM1O96005 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.59□□□□□ -1.52
CLPTM1O96005 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLPTM1O96005 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.59□□□□□ -1.52
CLPTM1O96005 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.58□□□□□ -1.52
CLPTM1O96005 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 CDC27P2-201ENST00000425026 1922 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 SMG1P5-202ENST00000529428 4219 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 SMG1P2-201ENST00000566127 4221 ntBASIC5.58□□□□□ -1.52
CLPTM1O96005 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLPTM1O96005 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CLPTM1O96005 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLPTM1O96005 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms