Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX3O60493 PPIAP23-201ENST00000420099 497 ntBASIC5.64□□□□□ -1.51
SNX3O60493 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX3O60493 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 AC073465.2-201ENST00000440938 498 ntBASIC5.64□□□□□ -1.51
SNX3O60493 SEPT7P6-201ENST00000469999 1143 ntBASIC5.64□□□□□ -1.51
SNX3O60493 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 AC008629.2-201ENST00000503783 483 ntBASIC5.64□□□□□ -1.51
SNX3O60493 IGLV3-24-201ENST00000517477 197 ntBASIC5.64□□□□□ -1.51
SNX3O60493 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 OR4C49P-201ENST00000563891 900 ntBASIC5.64□□□□□ -1.51
SNX3O60493 AC010547.7-201ENST00000570323 333 ntBASIC5.64□□□□□ -1.51
SNX3O60493 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX3O60493 AC009237.13-201ENST00000603193 276 ntBASIC5.64□□□□□ -1.51
SNX3O60493 AL583832.1-201ENST00000603227 784 ntBASIC5.64□□□□□ -1.51
SNX3O60493 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX3O60493 AL008582.1-201ENST00000609612 442 ntBASIC5.64□□□□□ -1.51
SNX3O60493 AL356608.1-201ENST00000610034 820 ntBASIC5.64□□□□□ -1.51
SNX3O60493 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX3O60493 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX3O60493 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 AC006453.3-201ENST00000635891 377 ntBASIC5.64□□□□□ -1.51
SNX3O60493 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX3O60493 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.64□□□□□ -1.51
SNX3O60493 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX3O60493 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SNX3O60493 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX3O60493 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX3O60493 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 AL359715.3-201ENST00000569267 2123 ntBASIC5.63□□□□□ -1.51
SNX3O60493 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNX3O60493 OR9K1P-201ENST00000326513 941 ntBASIC5.63□□□□□ -1.51
SNX3O60493 SNORA7A-201ENST00000384765 139 ntBASIC5.63□□□□□ -1.51
SNX3O60493 MIR188-201ENST00000385034 86 ntBASIC5.63□□□□□ -1.51
SNX3O60493 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNX3O60493 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX3O60493 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX3O60493 RNF10P1-201ENST00000418589 369 ntBASIC5.63□□□□□ -1.51
SNX3O60493 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX3O60493 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX3O60493 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX3O60493 RN7SL372P-201ENST00000461982 298 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX3O60493 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX3O60493 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX3O60493 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX3O60493 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 AC010409.2-201ENST00000505780 478 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.63□□□□□ -1.51
SNX3O60493 AC016559.2-201ENST00000510759 359 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX3O60493 AC114940.1-201ENST00000512162 1265 ntBASIC5.63□□□□□ -1.51
SNX3O60493 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX3O60493 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX3O60493 CYCSP25-201ENST00000525280 316 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX3O60493 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX3O60493 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.63□□□□□ -1.51
SNX3O60493 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX3O60493 AC011270.1-201ENST00000558606 583 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AC040958.1-201ENST00000561102 201 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.63□□□□□ -1.51
SNX3O60493 VN1R81P-201ENST00000602085 372 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AC006363.1-201ENST00000603806 463 ntBASIC5.63□□□□□ -1.51
SNX3O60493 GMCL1P2-201ENST00000605230 823 ntBASIC5.63□□□□□ -1.51
SNX3O60493 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.63□□□□□ -1.51
SNX3O60493 MIR6811-201ENST00000620409 58 ntBASIC5.63□□□□□ -1.51
SNX3O60493 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 AL929601.4-201ENST00000613011 1341 ntBASIC5.63□□□□□ -1.51
SNX3O60493 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX3O60493 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX3O60493 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX3O60493 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX3O60493 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX3O60493 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SNX3O60493 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SNX3O60493 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNX3O60493 AC068870.1-201ENST00000563737 2455 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms