Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MIR7109-201ENST00000613748 65 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.47□□□□□ -1.53
UPK1AO00322 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.47□□□□□ -1.53
UPK1AO00322 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.47□□□□□ -1.53
UPK1AO00322 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.47□□□□□ -1.53
UPK1AO00322 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.47□□□□□ -1.53
UPK1AO00322 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.47□□□□□ -1.53
UPK1AO00322 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 AL591135.1-201ENST00000401578 5914 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 FBXL21-201ENST00000297158 1305 ntBASIC5.47□□□□□ -1.53
UPK1AO00322 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.47□□□□□ -1.53
UPK1AO00322 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPK1AO00322 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
UPK1AO00322 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
UPK1AO00322 AC027088.4-201ENST00000611559 1947 ntBASIC5.46□□□□□ -1.53
UPK1AO00322 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.46□□□□□ -1.53
UPK1AO00322 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
UPK1AO00322 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.46□□□□□ -1.53
UPK1AO00322 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.46□□□□□ -1.53
UPK1AO00322 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
UPK1AO00322 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPK1AO00322 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPK1AO00322 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.46□□□□□ -1.54
UPK1AO00322 MFSD8-219ENST00000641228 2559 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.46□□□□□ -1.54
UPK1AO00322 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.46□□□□□ -1.54
UPK1AO00322 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.46□□□□□ -1.54
UPK1AO00322 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UPK1AO00322 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPK1AO00322 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPK1AO00322 RNU1-136P-201ENST00000384181 164 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 RPL11P3-201ENST00000395256 523 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.46□□□□□ -1.54
UPK1AO00322 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.46□□□□□ -1.54
UPK1AO00322 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.46□□□□□ -1.54
UPK1AO00322 RNU1-88P-201ENST00000459274 128 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.46□□□□□ -1.54
UPK1AO00322 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.46□□□□□ -1.54
UPK1AO00322 SETP21-201ENST00000514799 892 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.46□□□□□ -1.54
UPK1AO00322 WBP1LP3-201ENST00000523033 208 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 AC024405.1-201ENST00000532521 1042 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.46□□□□□ -1.54
UPK1AO00322 LINC00556-201ENST00000569603 412 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.46□□□□□ -1.54
UPK1AO00322 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.46□□□□□ -1.54
UPK1AO00322 AL583832.1-201ENST00000603227 784 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.46□□□□□ -1.54
UPK1AO00322 AC119674.1-217ENST00000641942 1086 ntBASIC5.46□□□□□ -1.54
UPK1AO00322 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.46□□□□□ -1.54
UPK1AO00322 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.46□□□□□ -1.54
UPK1AO00322 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPK1AO00322 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.46□□□□□ -1.54
UPK1AO00322 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.45□□□□□ -1.54
UPK1AO00322 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.45□□□□□ -1.54
UPK1AO00322 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 AP004607.3-201ENST00000530354 3915 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 RN7SKP187-201ENST00000365536 330 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 BX284632.2-201ENST00000421091 399 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 VTI1BP4-201ENST00000427516 527 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 AC069154.1-201ENST00000432914 542 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 DEFA9P-201ENST00000433042 285 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 AC015983.1-201ENST00000441577 373 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 AL512605.1-202ENST00000441919 381 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.45□□□□□ -1.54
UPK1AO00322 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 AL359955.2-201ENST00000445380 353 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 AP002884.1-201ENST00000479691 655 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 DEFB109A-201ENST00000482450 265 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 SEPT10P1-201ENST00000517342 1162 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.45□□□□□ -1.54
UPK1AO00322 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.45□□□□□ -1.54
UPK1AO00322 AP004609.2-201ENST00000532177 190 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.45□□□□□ -1.54
UPK1AO00322 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.45□□□□□ -1.54
UPK1AO00322 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
UPK1AO00322 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.45□□□□□ -1.54
UPK1AO00322 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.45□□□□□ -1.54
UPK1AO00322 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms