Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC023141.9-201ENST00000458734 412 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC006539.1-201ENST00000481419 501 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC131392.1-201ENST00000506490 633 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 RNA5SP438-201ENST00000516561 112 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 IGKV2-19-201ENST00000518132 283 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 CETN3-206ENST00000522864 738 ntTSL 3 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC016144.1-201ENST00000548175 1087 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 AL512652.1-201ENST00000619006 500 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 AL353743.3-201ENST00000442109 1468 ntBASIC8.56□□□□□ -1.04
USP35Q9P2H5 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
USP35Q9P2H5 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
USP35Q9P2H5 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC105749.1-201ENST00000631338 2008 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 MTND4P24-201ENST00000424002 397 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 RPS26P4-201ENST00000431743 355 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 ZNF965P-201ENST00000432501 817 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 CRYGGP-201ENST00000443337 145 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 HMGN1P36-201ENST00000446623 298 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC093770.1-201ENST00000511559 571 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 CR383656.14-201ENST00000551951 406 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 CKS1BP1-201ENST00000555221 240 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC091193.1-201ENST00000604640 448 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC131009.3-201ENST00000621809 287 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 MIR6719-201ENST00000622428 87 ntBASIC8.55□□□□□ -1.04
USP35Q9P2H5 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
USP35Q9P2H5 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
USP35Q9P2H5 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 AL161901.1-201ENST00000624954 3425 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 AL513325.1-201ENST00000417716 1034 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
USP35Q9P2H5 IGLV3-4-201ENST00000432300 244 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC245517.2-201ENST00000442890 346 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 RN7SL369P-201ENST00000477138 299 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 RN7SKP34-201ENST00000516142 244 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC007956.1-201ENST00000555623 542 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
USP35Q9P2H5 AC092121.1-201ENST00000569452 202 ntBASIC8.54□□□□□ -1.04
USP35Q9P2H5 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms