Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AC022034.1-201ENST00000512867 2156 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 NEPNP-201ENST00000404786 1371 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 AL137058.3-201ENST00000624531 3099 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL20A1Q9P218 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 OR13C1P-202ENST00000641378 2919 ntBASIC6.79□□□□□ -1.32
COL20A1Q9P218 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL20A1Q9P218 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 RNU6-152P-201ENST00000384037 107 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC007568.1-201ENST00000422912 471 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 TUBB4BP6-201ENST00000437576 479 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 VN1R48P-201ENST00000448149 1036 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 RN7SL57P-201ENST00000493687 290 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC008945.1-201ENST00000505144 499 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC027281.1-201ENST00000574178 758 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC135803.1-201ENST00000608748 565 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 RNA5SP440-201ENST00000612665 119 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 OR11H2-202ENST00000641517 1085 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 AC087269.2-201ENST00000641764 975 ntBASIC6.78□□□□□ -1.32
COL20A1Q9P218 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.78□□□□□ -1.32
COL20A1Q9P218 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL20A1Q9P218 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL20A1Q9P218 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL20A1Q9P218 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC106872.5-201ENST00000508856 1416 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 WDR95P-201ENST00000425638 1542 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 SHQ1P1-201ENST00000437111 1544 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 PARP4P2-201ENST00000446672 3326 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AL161901.1-201ENST00000624954 3425 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC087565.3-202ENST00000642085 1603 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 RNU4-39P-201ENST00000362455 127 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 SNORD8-201ENST00000363915 110 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 SNORA27.3-201ENST00000364937 134 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 OR7E101P-201ENST00000400428 513 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC016739.1-201ENST00000405359 345 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 MRPL53P1-201ENST00000414323 319 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 RPL36P18-201ENST00000419316 318 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AL445665.1-202ENST00000452436 324 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC134349.2-201ENST00000535136 910 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC011445.2-201ENST00000599274 173 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC024933.1-201ENST00000608472 348 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 MIR6886-201ENST00000619864 61 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 AC006453.5-201ENST00000636451 619 ntBASIC6.77□□□□□ -1.33
COL20A1Q9P218 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.77□□□□□ -1.33
COL20A1Q9P218 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms